Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:4536383 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45363834536775393hypothetical proteinBLASTP
45367724537740969hypothetical proteinBLASTP
453778845391851398hypothetical proteinBLASTP
45391824539514333hypothetical proteinBLASTP
453951845410231506hypothetical proteinBLASTP
45410594541448390hypothetical proteinBLASTP
45416724541794123hypothetical proteinBLASTP
45418354542017183hypothetical proteinBLASTP
454231845435651248hypothetical proteinBLASTP
45435774544191615hypothetical proteinBLASTP
45444024544944543hypothetical proteinBLASTP
45462574547177921hypothetical proteinBLASTP
45478684548203336hypothetical proteinBLASTP
45482994548679381hypothetical proteinBLASTP
45490504549259210hypothetical proteinBLASTP
45492774549678402hypothetical proteinBLASTP
45497154550011297hypothetical proteinBLASTP
45500894550547459hypothetical proteinBLASTP
455063645525851950hypothetical proteinBLASTP
45526574553565909hypothetical proteinBLASTP
45536394554538900hypothetical proteinBLASTP
45546144554940327hypothetical proteinBLASTP
45550404555195156hypothetical proteinBLASTP
455544145567151275DNA polymerase V subunit UmuCQuickGO ontologyBLASTP
45567154556921207hypothetical proteinBLASTP