Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:1205985 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
120598512073551371adenylosuccinate lyaseQuickGO ontologyBLASTP
12073591208000642hypothetical proteinBLASTP
120803612091421107tRNA-specific 2-thiouridylase MnmAQuickGO ontologyBLASTP
12091961209657462bifunctional thiamin pyrimidine pyrophosphate hydrolase thiamin pyrophosphate hydrolaseQuickGO ontologyBLASTP
1209667121032065423S rRNA pseudouridine synthase EQuickGO ontologyBLASTP
121049212117421251isocitrate dehydrogenaseQuickGO ontologyBLASTP
12118451212168324hypothetical proteinBLASTP
12128641213268405hypothetical proteinBLASTP
12134891214220732putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
121442512156361212putative FAD-binding phosphodiesteraseQuickGO ontologyBLASTP
12159501216186237hypothetical proteinBLASTP
12162291216501273hypothetical proteinBLASTP
12165301216796267hypothetical proteinBLASTP
12169091217157249hypothetical proteinBLASTP
121748912190121524inner membrane proteinQuickGO ontologyBLASTP
12191441219362219hypothetical proteinBLASTP
12224661222795330hypothetical proteinBLASTP
12228051223080276hypothetical protein
12238561224068213hypothetical proteinBLASTP
12244401224706267cell division topological specificity factor MinEQuickGO ontologyBLASTP
12247101225522813cell division inhibitor MinDQuickGO ontologyBLASTP
12255461226241696septum formation inhibitorQuickGO ontologyBLASTP
12267611227129369hypothetical proteinBLASTP
12272321227633402hypothetical proteinBLASTP
12278421228168327hypothetical proteinBLASTP
12282401228899660hypothetical proteinBLASTP
12289911229437447hypothetical proteinBLASTP
12309171231336420DNA polymerase V subunit UmuDQuickGO ontologyBLASTP
123133612326041269DNA polymerase V subunit UmuCQuickGO ontologyBLASTP