Pre_GI Gene

Some Help

Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:1315746 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
131574613171161371adenylosuccinate lyaseQuickGO ontologyBLASTP
13171201317761642hypothetical proteinBLASTP
131779713189031107tRNA-specific 2-thiouridylase MnmAQuickGO ontologyBLASTP
13189571319418462bifunctional thiamin pyrimidine pyrophosphate hydrolasethiamin pyrophosphate hydrolaseQuickGO ontologyBLASTP
1319428132008165423S rRNA pseudouridine synthase EQuickGO ontologyBLASTP
132025413215041251isocitrate dehydrogenaseQuickGO ontologyBLASTP
13217661322170405hypothetical proteinBLASTP
13223911323122732DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
132332713245381212FAD-binding phosphodiesteraseQuickGO ontologyBLASTP
13248521325088237hypothetical proteinBLASTP
13251311325403273hypothetical proteinBLASTP
13254321325698267hypothetical proteinBLASTP
13258111326059249hypothetical proteinBLASTP
13273811327599219hypothetical proteinBLASTP
13295731329902330hypothetical proteinBLASTP
13299121330256345hypothetical proteinBLASTP
13302581330431174hypothetical proteinBLASTP
13305321330717186coserved proteinQuickGO ontologyBLASTP
13315461331812267cell division topological specificity factor MinEQuickGO ontologyBLASTP
13318161332628813cell division inhibitor MinDQuickGO ontologyBLASTP
13326521333347696septum formation inhibitorQuickGO ontologyBLASTP
13338671334235369hypothetical proteinBLASTP
13343381334739402hypothetical proteinBLASTP
13349811335274294hypothetical proteinBLASTP
13353461336005660hypothetical proteinBLASTP
13360971336543447hypothetical proteinBLASTP
13373361337755420DNA polymerase V subunit UmuDQuickGO ontologyBLASTP
133775513390231269DNA polymerase V subunit UmuCQuickGO ontologyBLASTP
13390681339598531disulfide bond formation protein BQuickGO ontologyBLASTP