Pre_GI: BLASTP Hits

Some Help

Query: NC_009381:3680638:3690229 Yersinia pestis Pestoides F chromosome, complete genome

Start: 3690229, End: 3691308, Length: 1080

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:4075194407519440765191326Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,modification methylase0666
NC_010159:1288000:1295481129548112968061326Yersinia pestis Angola, complete genomemodification methylase0666
NC_003143:398748:4074494074494087741326Yersinia pestis CO92, complete genomemodification methylase0666
NC_008149:318860:3266573266573279821326Yersinia pestis Nepal516, complete genomemodification methylase0666
NC_008150:4373722:4383291438329143846161326Yersinia pestis Antiqua, complete genomemodification methylase0666
NC_004088:4202247:4211816421181642131411326Yersinia pestis KIM, complete genomemethyltransferase0666
NC_014029:452248:4609494609494622741326Yersinia pestis Z176003 chromosome, complete genomemodification methylase0666
NC_017154:394401:4031014031014044261326Yersinia pestis D106004 chromosome, complete genomemodification methylase0666
NC_017160:396600:4053014053014066261326Yersinia pestis D182038 chromosome, complete genomemodification methylase0666
NC_017168:687471:6970406970406983651326Yersinia pestis A1122 chromosome, complete genomemodification methylase0666
NC_005810:4306716:4316108431610843174391332Yersinia pestis biovar Microtus str. 91001, complete genomemodification methylase0661
NC_014376:317312:3242053242053254671263Clostridium saccharolyticum WM1 chromosome, complete genomemodification methylase3e-36152
NC_013890:1142500:1153526115352611547821257Dehalococcoides sp. GT chromosome, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)1e-29130
NC_020387:1257163:1268633126863312698891257Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase1e-29130
NC_013552:1187299:1199281119928112005371257Dehalococcoides sp. VS, complete genomeadenine-specific DNA methylase1e-29130
NC_013037:1072266:1087955108795510891931239Dyadobacter fermentans DSM 18053, complete genomeadenine-specific DNA methylase3e-25115
NC_012030:345837:3556403556403570011362Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeadenine-specific DNA methylase1e-21103