Pre_GI Gene

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Host: NC_013552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013552:1187299 Dehalococcoides sp. VS, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
118729911888581560vinyl chloride reductive dehalogenaseQuickGO ontologyBLASTP
118913111907831653ssrA integraseQuickGO ontologyBLASTP
11909881191572585DNA invertaseresolvaseQuickGO ontologyBLASTP
11915721192021450hypothetical proteinBLASTP
11922641192899636hypothetical proteinBLASTP
11928961193588693DNA modification proteinQuickGO ontologyBLASTP
119358511957832199hypothetical proteinBLASTP
11958611196616756hypothetical proteinBLASTP
119674311977711029phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP
11977681198421654hypothetical proteinBLASTP
11984501199250801hypothetical proteinBLASTP
119928112005371257adenine-specific DNA methylaseQuickGO ontologyBLASTP
12006591201375717hypothetical proteinBLASTP
120161812041072490DEAD-like helicaseQuickGO ontologyBLASTP
12041751204972798hypothetical proteinBLASTP
12057231205992270reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
12059941206443450reductive dehalogenaseQuickGO ontologyBLASTP
12066171206895279transposase IS3IS911-familyQuickGO ontologyBLASTP
12069281207731804transposaseQuickGO ontologyBLASTP
12083611209062702DNA-binding response regulatorQuickGO ontologyBLASTP
120909012106221533sensor histidine kinaseQuickGO ontologyBLASTP
12109361211217282reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
121122912126741446reductive dehalogenaseQuickGO ontologyBLASTP
12131511213420270reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
121344812149321485reductive dehalogenaseQuickGO ontologyBLASTP
121529212163531062sensory box sensor histidine kinaseQuickGO ontologyBLASTP
12163341217002669DNA-binding response regulator LuxR familyQuickGO ontologyBLASTP
12173241217611288reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
121763812191671530reductive dehalogenaseQuickGO ontologyBLASTP
121956912207021134sensor histidine kinaseQuickGO ontologyBLASTP
12206991221379681DNA-binding response regulatorQuickGO ontologyBLASTP
12216511221923273reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
122194512234261482reductive dehalogenaseQuickGO ontologyBLASTP
12236781224187510transcriptional regulator MarR familyQuickGO ontologyBLASTP
12242561224537282reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
122455812260571500reductive dehalogenaseQuickGO ontologyBLASTP
12263931226674282reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
122667712280981422reductive dehalogenaseQuickGO ontologyBLASTP
12282631228892630DNA-binding response regulatorQuickGO ontologyBLASTP
122892412322803357sensor histidine kinaseresponse regulatorQuickGO ontologyBLASTP
12326851232963279transposase IS3IS911-familyQuickGO ontologyBLASTP
12331701233799630transposaseQuickGO ontologyBLASTP
12342661234367102reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP