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Query: NC_009092:2644164 Shewanella loihica PV-4, complete genome

Start: 2644164, End: 2669291, Length: 25128

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome02797BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome02688BLASTN svgBLASTP svg
NC_009092:19899771989977201854528569Shewanella loihica PV-4, complete genome01306BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome1e-39172BLASTN svgBLASTP svg
NC_009092:37830003783000380209919100Shewanella loihica PV-4, complete genome2e-26129BLASTN svgBLASTP svg
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome1e-23119BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome6e-23117BLASTN svgBLASTP svg
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome2e-22115BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome2e-22115BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010995:42973614297361432094023580Cellvibrio japonicus Ueda107, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007626:3996000*3996000401964723648Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010334:30405893040589306315022562Shewanella halifaxensis HAW-EB4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012792:96229296229299068328392Variovorax paradoxus S110 chromosome 2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009052:21076922107692213162923938Shewanella baltica OS155, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011146:29162232916223294545129229Geobacter bemidjiensis Bem, complete genome3e-0661.9BLASTN svgBLASTP svg