Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1989977 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19899771990567591DoxX family proteinQuickGO ontologyBLASTP
19906631991211549nitroreductaseQuickGO ontologyBLASTP
19914691992200732beta-lactamase domain proteinQuickGO ontologyBLASTP
19922411992858618methyl-accepting chemotaxis proteinQuickGO ontology
19929351993438504GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
19936861994291606GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
19943181994770453GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
19948181995216399hypothetical protein
19953521995741390hypothetical protein
19960651996301237hypothetical protein
199707619985751500hypothetical protein
199973620012651530hypothetical proteinBLASTP
200126220053654104Proprotein convertase PQuickGO ontologyBLASTP
20053582005882525hypothetical proteinBLASTP
20064012006565165hypothetical protein
20065912006941351hydrogenase expressionsynthesis HypAQuickGO ontologyBLASTP
200694120079511011hydrogenase expressionformation protein HypEQuickGO ontologyBLASTP
200795420090691116hydrogenase expressionformation protein HypDQuickGO ontologyBLASTP
20090662009314249hydrogenase assembly chaperone hypChupFQuickGO ontologyBLASTP
20093172010150834hydrogenase accessory protein HypBQuickGO ontologyBLASTP
201030220126472346NiFe hydrogenase maturation protein HypFQuickGO ontologyBLASTP
201267320144601788hypothetical proteinBLASTP
20144412015004564hydrogenase expressionformation proteinQuickGO ontologyBLASTP
20150162015687672NiFe-hydrogenase b-type cytochrome subunitQuickGO ontologyBLASTP
201569820174041707nickel-dependent hydrogenase large subunitQuickGO ontologyBLASTP
201740920185451137hydrogenase NiFe small subunit HydAQuickGO ontologyBLASTP