Query: NC_009092:2529518 Shewanella loihica PV-4, complete genome
Start: 2529518, End: 2552506, Length: 22989
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013416:1588369 | 1588369 | 1612188 | 23820 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009074:2914053* | 2914053 | 2939258 | 25206 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 8e-22 | 113 | BLASTN svg | BLASTP svg |
NC_013282:2582720 | 2582720 | 2607562 | 24843 | Cronobacter turicensis, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_020181:734477 | 734477 | 755863 | 21387 | Enterobacter aerogenes EA1509E, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_015663:4735808 | 4735808 | 4758099 | 22292 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015663:4767443 | 4767443 | 4796599 | 29157 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_006512:1942000 | 1942000 | 1965968 | 23969 | Idiomarina loihiensis L2TR, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008463:1912348* | 1912348 | 1954182 | 41835 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 8e-22 | 113 | BLASTN svg | BLASTP svg |
NC_015556:1899850 | 1899850 | 1921838 | 21989 | Pseudomonas fulva 12-X chromosome, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_005773:1851116* | 1851116 | 1875599 | 24484 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_020211:2985157 | 2985157 | 3009257 | 24101 | Serratia marcescens WW4, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_009092:3682413 | 3682413 | 3701943 | 19531 | Shewanella loihica PV-4, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_009092:3239500 | 3239500 | 3261290 | 21791 | Shewanella loihica PV-4, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009092:2589000 | 2589000 | 2615186 | 26187 | Shewanella loihica PV-4, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009092:1504363 | 1504363 | 1580103 | 75741 | Shewanella loihica PV-4, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 5e-54 | 220 | BLASTN svg | BLASTP svg |
NC_009092:1305355 | 1305355 | 1328936 | 23582 | Shewanella loihica PV-4, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009092:261778 | 261778 | 284599 | 22822 | Shewanella loihica PV-4, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_009092:1935281 | 1935281 | 1959285 | 24005 | Shewanella loihica PV-4, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |