Pre_GI: BLASTP Hits

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Query: NC_008542:1021848:1034227 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 1034227, End: 1036467, Length: 2241

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008060:476861:4895804895804918202241Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencePhage-plasmid primase P4-like01449
NC_009012:3354477:3362822336282233649752154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family1e-109398
NC_009012:2356500:2366420236642023685732154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family2e-107390
NC_009012:3354477:3383076338307633852292154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family7e-107388
NC_015660:1076159:1089446108944610917432298Geobacillus thermoglucosidasius C56-YS93 chromosome, completephage/plasmid primase, P4 family5e-80299
NC_016627:1723104:1741360174136017436002241Clostridium clariflavum DSM 19732 chromosome, complete genomephage/plasmid primase, P4 family, C-terminal domain protein7e-76285
NC_006322:3418268:3458909345890934613262418Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-74280
NC_006270:3418097:3458738345873834611552418Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein3e-74280
NC_015578:2026741:2039179203917920405731395Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein4e-74280
NC_016026:296951:3065803065803088382259Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage/plasmid primase, P4 family2e-72273
NC_013768:1260317:1273256127325612755442289Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-70267
NC_013766:1293144:1306552130655213088402289Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-70267
NC_015578:1940097:1975443197544319768791437Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein4e-69263
NC_003212:2592600:2610169261016926124422274Listeria innocua Clip11262, complete genomehypothetical protein3e-68260
NC_010814:3332088:3335396333539633374832088Geobacter lovleyi SZ, complete genomephage/plasmid primase, P4 family9e-68258
NC_015428:1544728:1579545157954515818482304Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage/plasmid primase, P4 family2e-64248
NC_010610:535790:5463765463765486852310Lactobacillus fermentum IFO 3956, complete genomephage primase5e-64246
NC_014727:1220869:1264933126493312672872355Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA-polymerase or DNA-primase2e-63244
NC_003295:856775:8796328796328819292298Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-62240
NC_014311:198542:2200012200012222802280Ralstonia solanacearum PSI07 chromosome, complete genomeDNA primase, phage/plasmid5e-61236
NC_011663:2813033:2817770281777028204722703Shewanella baltica OS223 chromosome, complete genomeP4 family phage/plasmid primase2e-60234
NC_007645:5801295:5801295580129558035712277Hahella chejuensis KCTC 2396, complete genomepredicted ATPase7e-60232
NC_015726:3452232:3461482346148234638632382Cupriavidus necator N-1 chromosome 1, complete sequencephage/plasmid primase, P4 family1e-59232
NC_010002:3753000:3753413375341337559862574Delftia acidovorans SPH-1, complete genomephage/plasmid primase, P4 family2e-59231
NC_012796:77071:1010401010401028601821Desulfovibrio magneticus RS-1, complete genomehypothetical protein5e-59229
NC_015422:2078618:2103438210343821057382301Alicycliphilus denitrificans K601 chromosome, complete genomephage/plasmid primase, P4 family3e-58227
NC_012796:1645856:1656031165603116574791449Desulfovibrio magneticus RS-1, complete genomehypothetical protein6e-58226
NC_016027:1776300:1779302177930217807201419Gluconacetobacter xylinus NBRC 3288, complete genomephage/plasmid primase P48e-58225
NC_009256:3601080:3601080360108036034072328Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein1e-56221
NC_010162:5651746:5663639566363956650151377Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-55217
NC_004463:9031331:9047328904732890487551428Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-54213
NC_008751:1043269:1083858108385810860742217Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid/phage primase, P4 family1e-52208
NC_010172:5447189:5465724546572454678172094Methylobacterium extorquens PA1, complete genomephage/plasmid primase, P4 family1e-51205
NC_012988:1777618:1794199179419917964302232Methylobacterium extorquens DM4, complete genomeP4 family phage/plasmid primase9e-51202
NC_014365:2843126:2849838284983828520722235Desulfarculus baarsii DSM 2075 chromosome, complete genomephage/plasmid primase, P4 family2e-50201
NC_017249:4365935:4375251437525143766691419Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-50200
NC_014365:2888897:2892843289284328950922250Desulfarculus baarsii DSM 2075 chromosome, complete genomephage/plasmid primase, P4 family6e-50199
NC_003888:6103534:6111554611155461138242271Streptomyces coelicolor A3(2), complete genomeATP binding protein2e-48194
NC_010511:1273610:1292577129257712939801404Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein1e-47192
NC_014923:4017575:4036155403615540375101356Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completephage/plasmid primase, P4 family3e-46187
NC_003903:167825:1867101867101882301521Streptomyces coelicolor A3(2) plasmid SCP1, complete sequenceputative dna primase/helicase2e-41171
NC_011837:3226500:3233588323358832358972310Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-41169
NC_009706:3291330:3302086330208633043952310Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-41169
NC_009464:931647:9434179434179460202604Uncultured methanogenic archaeon RC-I, complete genomehypothetical phage-like protein1e-40168
NC_011757:2030631:2046753204675320482101458Methylobacterium chloromethanicum CM4, complete genomephage/plasmid primase, P4 family9e-40165
NC_015275:4055148:4096380409638040976301251Clostridium lentocellum DSM 5427 chromosome, complete genomeBifunctional DNA primase/polymerase3e-37157
NC_012796:4693500:4745792474579247472281437Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-37156
NC_015697:468234:4751084751084773632256Lactobacillus reuteri SD2112 chromosome, complete genomeP4 family prophage LambdaSa04 protein5e-35150
NC_015697:506494:5161025161025183572256Lactobacillus reuteri SD2112 chromosome, complete genomeP4 family prophage LambdaSa04 protein1e-34148
NC_014393:4775452:4816395481639548186622268Clostridium cellulovorans 743B chromosome, complete genomephage/plasmid primase, P4 family4e-34147
NC_007973:2888824:2896361289636128982591899Ralstonia metallidurans CH34 chromosome 1, complete sequencePhage/plasmid primase P4-like protein1e-33145
NC_008530:1454118:1464863146486314672292367Lactobacillus gasseri ATCC 33323, complete genomePhage DNA polymerase, ATPase domain3e-32140
NC_007432:654904:6685616685616708462286Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA primase, P4 family6e-32139
NC_013740:1218429:1217314121731412184321119Acidaminococcus fermentans DSM 20731, complete genomephage/plasmid primase, P4 family2e-31138
NC_002936:67896:6789667896701692274Dehalococcoides ethenogenes 195, complete genomephage/plasmid DNA primase, putative9e-31135
NC_013665:1766158:1779852177985217811711320Methanocella paludicola SANAE, complete genomehypothetical protein4e-30133
NC_016077:1944000:1944131194413119464192289Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein7e-30132
NC_014639:3520874:3539399353939935412251827Bacillus atrophaeus 1942 chromosome, complete genomeP4 family phage/plasmid primase4e-28127
CP002207:3520874:3539399353939935412251827Bacillus atrophaeus 1942, complete genomeP4 family phage/plasmid primase4e-28127
NC_014972:210500:2121342121342137501617Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage/plasmid primase, P4 family6e-26119
NC_002607:169721:1809161809161834892574Halobacterium sp. NRC-1, complete genomehypothetical protein2e-25117
NC_021064:1211480:121722612172261218119894Propionibacterium avidum 44067, complete genomephage-associated protein3e-25117
NC_009012:2356500:236035523603552361155801Clostridium thermocellum ATCC 27405, complete genomehypothetical protein7e-25116
NC_009012:3324000:333976333397633340554792Clostridium thermocellum ATCC 27405, complete genomehypothetical protein3e-23111
NC_010511:1273610:129396712939671294836870Methylobacterium sp. 4-46 chromosome, complete genomebifunctional DNA primase/polymerase1e-22109
NC_015703:5649260:5655640565564056572231584Runella slithyformis DSM 19594 chromosome, complete genomephage/plasmid primase, P4 family2e-22108
NC_006138:1735723:1751165175116517529461782Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-22108
NC_013446:4511602:4530150453015045312681119Comamonas testosteroni CNB-2, complete genomePhage/plasmid primase P4, C-terminal protein2e-21104
NC_009012:3354477:337019433701943370994801Clostridium thermocellum ATCC 27405, complete genomeprophage Lp4 protein 7, DNA replication3e-21104
NC_019897:3810000:3853817385381738559282112Thermobacillus composti KWC4 chromosome, complete genomephage/plasmid primase, P4 family, C-terminal domain-containing protein2e-20101
NC_015520:3038770:305657330565733057388816Mahella australiensis 50-1 BON chromosome, complete genomebifunctional DNA primase/polymerase3e-20100
NC_014393:1022843:1027660102766010303412682Clostridium cellulovorans 743B chromosome, complete genomeBifunctional DNA primase/polymerase7e-2099.8
NC_020054:465413:4699164699164713911476Fibrella aestuarina BUZ 2 drat genomeP4 family phage/plasmid primase2e-1998.2
NC_012985:1191125:1223290122329012256592370Candidatus Liberibacter asiaticus str. psy62, complete genomeP4 family phage/plasmid primase5e-1997.1
NC_008009:4421992:4428141442814144305402400Acidobacteria bacterium Ellin345, complete genomeprimase P4-like protein2e-1894.7
NC_017030:8599515:8615278861527886180072730Corallococcus coralloides DSM 2259 chromosome, complete genomeBifunctional DNA Primase/polymerase3e-1894.4
NC_013730:3729626:3754581375458137560411461Spirosoma linguale DSM 74, complete genomephage/plasmid primase, P4 family6e-1893.2
NC_014774:171500:2032292032292052892061Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeP4 family phage/plasmid primase2e-1791.7
NC_002937:2263763:2286231228623122887232493Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeprimase, putative2e-1791.7
NC_015558:905227:9146429146429170382397Streptococcus parauberis KCTC 11537 chromosome, complete genomeDNA primase/helicase protein5e-1790.1
NC_014253:431942:4420874420874437241638Methanohalobium evestigatum Z-7303 chromosome, complete genomephage/plasmid primase7e-1789.7
NC_014762:2428721:2439390243939024407811392Sulfuricurvum kujiense DSM 16994 chromosome, complete genomephage/plasmid primase, p4 family9e-1789.4
NC_012471:2080902:2093767209376720961512385Streptococcus equi subsp. equi 4047, complete genomephage DNA primase/helicase protein3e-1687.4
NC_004070:1431146:1438856143885614412402385Streptococcus pyogenes MGAS315, complete genomeputative DNA primase/helicase - phage associated4e-1687
NC_004606:446427:4556454556454580292385Streptococcus pyogenes SSI-1, complete genomeputative DNA primase (phage associated)4e-1687
NC_006086:35599:4481744817472012385Streptococcus pyogenes MGAS10394, complete genomevirulence-associated protein E4e-1687
NC_014774:1210004:1244100124410012451011002Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeP4 family phage/plasmid primase4e-1687
NC_011375:749693:7590757590757614592385Streptococcus pyogenes NZ131 chromosome, complete genomeDNA primase/helicase-phage associated6e-1686.7
NC_009332:1050353:1058083105808310604672385Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA primase/helicase protein6e-1686.7
NC_016027:1776300:178071717807171781520804Gluconacetobacter xylinus NBRC 3288, complete genomeDNA recombinase8e-1686.3
NC_008021:1401249:1408472140847214108562385Streptococcus pyogenes MGAS9429, complete genomeDNA primase9e-1685.9
NC_007297:1406796:1414019141401914164032385Streptococcus pyogenes MGAS5005, complete genomeDNA primase9e-1685.9
NC_008023:1426687:1432362143236214347462385Streptococcus pyogenes MGAS2096, complete genomeDNA primase9e-1685.9
NC_012803:3691:296482964830592945Micrococcus luteus NCTC 2665, complete genomehypothetical protein2e-1584.7
NC_010617:988758:100387710038771004782906Kocuria rhizophila DC2201, complete genomehypothetical protein4e-1584
NC_020126:2381380:2397905239790524004542550Myxococcus stipitatus DSM 14675, complete genomeBifunctional DNA Primase/polymerase6e-1583.2
NC_013929:5952380:5955955595595559574121458Streptomyces scabiei 87.22 chromosome, complete genomeNTP-binding protein4e-1480.9
NC_015676:794639:8056708056708078322163Methanosalsum zhilinae DSM 4017 chromosome, complete genomephage/plasmid primase, P4 family6e-1480.1
NC_008024:804157:811604811604812416813Streptococcus pyogenes MGAS10750, complete genomephage protein1e-1379
NC_015416:1679188:1693618169361816947541137Methanosaeta concilii GP-6 chromosome, complete genomephage/plasmid primase, P4 family2e-1378.6
NC_014974:1570037:158510715851071586009903Thermus scotoductus SA-01 chromosome, complete genomebifunctional DNA primase/polymerase, N- family2e-1378.6
NC_010572:3363830:340155534015553402439885Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1378.6
NC_008022:771767:780337780337781149813Streptococcus pyogenes MGAS10270, complete genomephage protein2e-1378.2
NC_015656:132633:159042159042159680639Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase2e-1378.2
NC_016111:613729:620521620521621390870Streptomyces cattleya NRRL 8057, complete genomebifunctional DNA primase/polymerase3e-1377.4
NC_016625:1259778:1263919126391912649351017Burkholderia sp. YI23 chromosome 2, complete sequenceputative primase/helicase protein6e-1376.6
NC_010644:1540249:154518315451831545950768Elusimicrobium minutum Pei191, complete genomebifunctional DNA primase/polymerase9e-1376.3
NC_008024:548165:555431555431556243813Streptococcus pyogenes MGAS10750, complete genomephage protein1e-1275.5
NC_008021:531730:538996538996539808813Streptococcus pyogenes MGAS9429, complete genomephage protein1e-1275.5
NC_015656:5084767:509173950917395092617879Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase4e-1273.9
NC_010516:2328288:2332726233272623345911866Clostridium botulinum B1 str. Okra, complete genomephage primase, P4 family6e-1273.6
NC_019974:2179000:2203055220305522051992145Natronococcus occultus SP4, complete genomephage/plasmid primase, P4 family, C-terminal domain protein2e-1171.6
NC_015576:1442713:144343714434371444348912Mycobacterium sp. JDM601 chromosome, complete genomeRecA-family ATPase-like protein5e-1170.5
NC_016026:2082500:2092628209262820943341707Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeprimase family protein1e-1069.3
NC_019673:1988853:202206520220652022901837Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1068.9
NC_013729:5982000:599219759921975993075879Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase1e-1068.9
NC_009142:7820251:7835759783575978367721014Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-1068.6
NC_017249:4365935:437678543767854377621837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1067.4
NC_015312:1191633:119453211945321195479948Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeBifunctional DNA primase/polymerase5e-1067
NC_017249:5255967:525596752559675256803837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1066.6
NC_014815:3272791:329106232910623291961900Micromonospora sp. L5 chromosome, complete genomebifunctional DNA primase/polymerase1e-0966.2
NC_014253:312354:3202663202663217051440Methanohalobium evestigatum Z-7303 chromosome, complete genomephage/plasmid primase1e-0965.9
NC_013729:2287884:229122822912282292154927Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase1e-0965.5
NC_021177:6127431:6135060613506061372612202Streptomyces fulvissimus DSM 40593, complete genomeATP binding protein2e-0965.1
NC_013729:380312:397209397209398081873Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase2e-0965.1
NC_008942:1706191:1719310171931017211301821Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0964.7
NC_011832:2668337:2679234267923426807571524Candidatus Methanosphaerula palustris E1-9c, complete genomephage/plasmid primase, P4 family3e-0964.3
NC_013929:5952380:595784059578405958745906Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-0964.3
NC_021177:4221309:424510542451054246019915Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein1e-0862.4
NC_009142:1242850:124912612491261250070945Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-0861.6
NC_003106:922773:9279469279469306542709Sulfolobus tokodaii str. 7, complete genomehypothetical protein3e-0860.8
NC_012589:1434707:1439195143919514418522658Sulfolobus islandicus L.S.2.15, complete genomephage/plasmid primase, P4 family3e-0860.8
NC_002754:105256:1154761154761170741599Sulfolobus solfataricus P2, complete genomePrimase (Carboxy-end fragment)9e-0859.7
NC_003155:5163382:516918951691895170106918Streptomyces avermitilis MA-4680, complete genomehypothetical protein8e-0859.7
NC_007929:785875:795859795859796728870Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage DNA primase1e-0759.3
NC_014319:587977:595895595895596713819Leuconostoc gasicomitatum LMG 18811, complete genomeprophage DNA replication protein1e-0758.9
NC_015428:21724:296982969830462765Lactobacillus buchneri NRRL B-30929 chromosome, complete genomebifunctional DNA primase/polymerase2e-0758.2
NC_010610:269380:289237289237290061825Lactobacillus fermentum IFO 3956, complete genomehypothetical protein5e-0757
NC_012471:781063:792627792627793454828Streptococcus equi subsp. equi 4047, complete genomephage protein7e-0756.6
NC_014972:1126426:1146953114695311485991647Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage/plasmid primase, P4 family7e-0756.6
NC_015656:4367764:437685843768584377760903Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase1e-0656.2
NC_015593:2103815:2115421211542121175052085Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeBifunctional DNA primase/polymerase2e-0655.5
NC_017186:361444:373883373883374839957Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-0655.5
NC_011891:17940:2457824578262241647Anaeromyxobacter dehalogenans 2CP-1, complete genomeATPase-like protein1e-0655.5
NC_013729:3573000:359049435904943591417924Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase5e-0653.9
NC_002655:301940:3195023195023218922391Escherichia coli O157:H7 EDL933, complete genomealpha replication protein of prophage CP-933I7e-0653.1
NC_013008:306953:3247503247503270832334Escherichia coli O157:H7 str. TW14359 chromosome, complete genomealpha replication protein of prophage CP-933I7e-0653.1
NC_011353:305820:3234383234383257712334Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoside triphosphatase, D5 family7e-0653.1
NC_002695:301939:3195583195583218912334Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA primase7e-0653.1
NC_013941:338121:3604753604753628652391Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAlpha replication protein of prophage CP-933I9e-0652.8