Pre_GI Gene

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Host: NC_010610 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010610:535790 Lactobacillus fermentum IFO 3956, complete genome

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
535790536200411hypothetical proteinBLASTP
536237536983747hypothetical proteinBLASTP
537219538064846hypothetical proteinBLASTP
5394135405341122integraseQuickGO ontologyBLASTP
542998543198201hypothetical protein
543201543686486hypothetical proteinBLASTP
543711544391681hypothetical proteinBLASTP
5443845457301347phage helicaseQuickGO ontologyBLASTP
545750546310561hypothetical proteinBLASTP
5463765486852310phage primaseQuickGO ontologyBLASTP
548986549330345hypothetical proteinBLASTP
550838551746909hypothetical proteinBLASTP
552537552998462phage terminaseQuickGO ontologyBLASTP
5529955548991905phage terminaseQuickGO ontologyBLASTP
554914555096183hypothetical protein
5550965563161221phage portal proteinQuickGO ontologyBLASTP
5567655580271263phage capsid proteinQuickGO ontologyBLASTP
558048558350303hypothetical proteinBLASTP
558569559120552hypothetical proteinBLASTP
559503560126624hypothetical protein
560193560522330hypothetical protein
5607275649264200hypothetical proteinBLASTP