Pre_GI Gene

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Host: NC_010610 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010610:269380 Lactobacillus fermentum IFO 3956, complete genome

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
269380270261882heat shock proteinQuickGO ontologyBLASTP
2703502713511002hypothetical proteinBLASTP
2713672728601494lysyl-tRNA synthaseQuickGO ontologyBLASTP
273501275068156816S ribosomal RNAQuickGO ontologyBLASTP
27515927523274tRNA-IleQuickGO ontology
27523727530973tRNA-AlaQuickGO ontologyBLASTP
275464278383292023S ribosomal RNAQuickGO ontologyBLASTP
2784482785611145S ribosomal RNAQuickGO ontologyBLASTP
27857027864273tRNA-AsnQuickGO ontology
27869027876273tRNA-ThrQuickGO ontologyBLASTP
281848282612765hypothetical protein
285332285574243hypothetical protein
286074286640567hypothetical protein
289237290061825hypothetical proteinBLASTP
290720290986267hypothetical protein
2913002924121113hypothetical protein
2925302936331104integraseQuickGO ontologyBLASTP