Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:5952380 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
595238059540141635penicillin-binding proteinQuickGO ontologyBLASTP
595430759556141308phage integraseQuickGO ontologyBLASTP
59556565955928273DNA-binding proteinQuickGO ontologyBLASTP
595595559574121458NTP-binding proteinQuickGO ontologyBLASTP
59574095957843435hypothetical protein
59578405958745906hypothetical proteinBLASTP
59588335959291459hypothetical protein
59593035959761459hypothetical proteinBLASTP
595997059620842115plasmid proteinQuickGO ontologyBLASTP
59621765962493318hypothetical proteinBLASTP
59624875962804318hypothetical proteinBLASTP
59628255963709885hypothetical proteinBLASTP
59637065964155450hypothetical proteinBLASTP
59641525964421270hypothetical proteinBLASTP
59650585965897840regulatorQuickGO ontologyBLASTP
59660085966559552hypothetical proteinBLASTP
596785659697811926hypothetical proteinBLASTP
597038159719581578hypothetical proteinBLASTP