Pre_GI: BLASTP Hits

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Query: NC_013929:5952380:5955656 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5955656, End: 5955928, Length: 273

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:3249756:326138232613823261720339Streptomyces venezuelae ATCC 10712, complete genomeexcisionase or Xis_9e-23105
NC_018750:2118907:214178821417882142009222Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-22103
NC_003155:4906639:490795549079554908194240Streptomyces avermitilis MA-4680, complete genomehypothetical protein1e-1994.7
NC_015312:5579078:559473855947385594917180Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeexcisionase/Xis, DNA-binding protein2e-1064.7
NC_014210:723719:739842739842740018177Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,excisionase/Xis, DNA-binding protein5e-1063.2
NC_014391:6000834:601643860164386016626189Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeexcisionase/Xis, DNA-binding5e-0959.7
NC_014666:1601972:160661316066131606810198Frankia sp. EuI1c chromosome, complete genomeDNA binding domain protein, excisionase family2e-0858.2
NC_015434:5411:541154115596186Verrucosispora maris AB-18-032 chromosome, complete genomeexcisionase/Xis, DNA-binding protein2e-0857.8
NC_019673:1275627:129574112957411295932192Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0857
NC_013093:1411882:142905614290561429235180Actinosynnema mirum DSM 43827, complete genomeregulatory protein MerR5e-0856.6
NC_015434:6020178:604229960422996042493195Verrucosispora maris AB-18-032 chromosome, complete genomeexcisionase/Xis, DNA-binding protein5e-0856.6
NC_014830:3275474:328174532817453281930186Intrasporangium calvum DSM 43043 chromosome, complete genomeexcisionase/Xis, DNA-binding protein3e-0753.9
NC_014211:439611:455740455740455949210Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidhypothetical protein4e-0753.5
NC_013093:1213908:123677212367721236951180Actinosynnema mirum DSM 43827, complete genome7e-0752.8
NC_017186:6539181:655819765581976558409213Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein8e-0752.4
NC_014318:6539137:655815365581536558365213Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein8e-0752.4
NC_009921:1736000:173925217392521739521270Frankia sp. EAN1pec, complete genomeexcision promoter, Xis2e-0651.2