Pre_GI: BLASTP Hits

Some Help

Query: NC_013929:5952380:5964152 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5964152, End: 5964421, Length: 270

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:5042283:504919750491975049466270Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-1478.6
NC_013929:6251989:626233062623306262599270Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1477.8
NC_015957:10403997:104269321042693210427201270Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein5e-0959.7
NC_016114:3008500:302220830222083022474267Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein1e-0858.9
NC_010572:4181403:419597941959794196245267Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0858.5
NC_016114:4210173:422636442263644226633270Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein1e-0858.2
NC_018750:2118907:213307321330732133339267Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein5e-0856.6
NC_018750:2696000:270168427016842701950267Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-0650.4