Pre_GI: BLASTP Hits

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Query: NC_013929:5952380:5965058 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5965058, End: 5965897, Length: 840

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:5042283:504989350498935050702810Streptomyces coelicolor A3(2), complete genomeregulator2e-135482
NC_016114:4210173:422452142245214225309789Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator1e-121435
NC_018750:4333064:433993843399384340732795Streptomyces venezuelae ATCC 10712, complete genomeputative regulatory protein KorSA, GntR-family transcriptional regulator2e-119428
NC_008278:296526:307974307974308765792Frankia alni ACN14a, complete genomePutative regulatory protein KorSA, GntR-family transcriptional regulator2e-63242
NC_013093:1411882:141862814186281419329702Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family8e-50197
NC_014666:7152782:716610971661097166882774Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, GntR family6e-26117
NC_013929:5248000:526121052612105261998789Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator2e-24113
NC_016947:666627:675648675648676442795Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein3e-24112
NC_018750:2270314:227346522734652274223759Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-24112
NC_003155:4592000:462092046209204621708789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator7e-24111
NC_020133:5485528:549970854997085500487780Mycobacterium liflandii 128FXT, complete genomeregulatory protein7e-24110
NC_003888:4613000:462376646237664624524759Streptomyces coelicolor A3(2), complete genomeGntR-family regulatory protein7e-24110
NC_013595:151500:158906158906159691786Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-23109
NC_003155:4906639:491297149129714913759789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator4e-23108
NC_003888:3602753:360891636089163609695780Streptomyces coelicolor A3(2), complete genomekorSA, regulatory protein1e-22107
NC_016948:678939:688007688007688786780Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator4e-22105
NC_003888:6103534:613628961362896137068780Streptomyces coelicolor A3(2), complete genometranscriptional regulator5e-22104
NC_013093:1411882:142248314224831423250768Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family1e-21103
NC_013235:682902:696087696087696872786Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family5e-21101
NC_015656:1469501:148617614861761486967792Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain1e-20100
NC_016114:3575955:358320535832053583984780Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator2e-20100
NC_021177:4124839:413883841388384139617780Streptomyces fulvissimus DSM 40593, complete genomekorSA, regulatory protein2e-2099.8
NC_017904:666285:673503673503674108606Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein2e-1996.3
NC_010572:3925803:393580339358033936576774Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative GntR-family transcriptional regulator2e-1893.2
NC_014815:5888934:590554959055495906340792Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family3e-1789.4
NC_007777:5087405:509495850949585095722765Frankia sp. CcI3, complete genometranscriptional regulator, GntR family6e-1788.2
NC_015656:381554:392794392794393570777Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain4e-1685.1
NC_014210:144036:153050153050153823774Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family1e-1583.6
NC_014391:6000834:600856660085666009357792Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein GntR HTH3e-1582.4
NC_016113:803268:812013812013812744732Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceProtein korA4e-1582
NC_013510:39975:487834878349517735Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family6e-1581.6
NC_021177:3997727:401079340107934011446654Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulatory protein3e-1479.3
NC_003888:3602753:361548036154803616235756Streptomyces coelicolor A3(2), complete genomegntR-family regulator4e-1478.6
NC_003888:4377000:438361643836164384371756Streptomyces coelicolor A3(2), complete genomeGntR-family transcriptional regulator1e-1377
NC_016114:3575955:359011635901163590871756Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator5e-1375.1
NC_003155:6667928:667252966725296673287759Streptomyces avermitilis MA-4680, complete genomeGntR-family transcriptional regulator1e-1273.9
NC_014210:723719:733347733347734111765Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family1e-1273.6
NC_013595:151500:157111157111157848738Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-1273.2
NC_014815:658893:664402664402665223822Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family6e-1271.6
NC_013131:9903320:992508499250849925812729Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, GntR family2e-1170.1
NC_017093:2357583:236657423665742367317744Actinoplanes missouriensis 431, complete genomeGntR family transcriptional regulator7e-1167.8
NC_021177:4124839:412860941286094129364756Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, GntR family1e-1067.4
NC_013235:508585:524691524691525431741Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family2e-1066.6
NC_014210:5270643:528191152819115282651741Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family4e-1065.5
NC_013595:702482:714904714904715620717Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-0963.5
NC_003155:4592000:460272746027274603485759Streptomyces avermitilis MA-4680, complete genomeGntR-family transcriptional regulator1e-0860.5
NC_021177:2034722:204010320401032040867765Streptomyces fulvissimus DSM 40593, complete genomeGntR-family transcriptional regulator2e-0859.7
NC_006677:1255079:126827412682741269014741Gluconobacter oxydans 621H, complete genomeHistidine utilization repressor2e-0859.7
NC_016516:463460:483329483329484072744Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeUbiC transcription regulator-associated protein2e-0859.7
NC_016511:472666:492533492533493276744Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeUbiC transcription regulator-associated protein2e-0859.7
NC_014039:499233:519096519096519839744Propionibacterium acnes SK137 chromosome, complete genomeUbiC transcription regulator-associated2e-0859.7
NC_006085:481231:501099501099501842744Propionibacterium acnes KPA171202, complete genomeGntR-family transcriptional regulator2e-0859.7
NC_013510:5115500:512327551232755124111837Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family4e-0858.9
NC_010999:623489:623489623489624226738Lactobacillus casei, complete genomeTranscriptional regulator6e-0858.2
NC_016115:62493:637116371164466756Streptomyces flavogriseus ATCC 33331 plasmid pSFLA02, completetranscriptional regulator, GntR family8e-0857.8
NC_015389:1977736:198394319839431984632690Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family2e-0756.6
NC_015389:1070500:109313610931361093876741Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family6e-0755.1
NC_007643:1504758:152827515282751529009735Rhodospirillum rubrum ATCC 11170, complete genomeTranscriptional Regulator, Histidine utilization repressor, GntR family7e-0754.7
NC_007492:3180480:322535632253563226087732Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, GntR family9e-0754.3
NC_011745:2399313:240125324012532401999747Escherichia coli ED1a chromosome, complete genomeputative DNA-binding transcriptional regulator8e-0754.3
NC_014363:114239:129522129522129881360Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family1e-0653.9
NC_015424:2510764:252788125278812528600720Aeromonas veronii B565 chromosome, complete genometranscriptional regulator of succinyl-CoA synthetase operon1e-0653.9
NC_009792:642881:657290657290658036747Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0653.9
NC_015563:313283:3289733289733303791407Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator with aminotransferase domain1e-0653.5
NC_008390:2156188:215618821561882156958771Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, GntR family2e-0653.1
NC_007384:2251792:225373222537322254478747Shigella sonnei Ss046, complete genomeputative transcriptional regulator3e-0652.8
NC_002695:2854629:285556828555682856314747Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator3e-0652.8
NC_002655:2925787:292578729257872926533747Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator3e-0652.8
AC_000091:2185369:218536921853692186115747Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator3e-0652.8
CP002185:2347413:235062723506272351373747Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator3e-0652.8
NC_010473:2267851:227106522710652271811747Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator3e-0652.8
CU928160:2239637:224157722415772242323747Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0652.8
NC_010468:1694729:171221617122161712962747Escherichia coli ATCC 8739, complete genometranscriptional regulator, GntR family3e-0652.8
NC_003888:4377000:438548643854864386217732Streptomyces coelicolor A3(2), complete genomeGntR-family transcriptional regulator2e-0652.8
NC_016822:2341127:234306723430672343813747Shigella sonnei 53G, complete genomeGntR family transcriptional regulator3e-0652.8
NC_013008:2851342:285134228513422852088747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator3e-0652.8
NC_012759:2069326:207254020725402073286747Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0652.8
NC_011741:2239637:224157722415772242323747Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0652.8
NC_011353:2852362:285236228523622853108747Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeGntR family transcriptional regulator3e-0652.8
NC_011750:955451:973500973500974246747Escherichia coli IAI39 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0652.4
NC_006905:2235607:226199722619972262743747Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory protein, gntR family5e-0652
NC_011149:2179592:220506922050692205815747Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, GntR family5e-0652
NC_003198:2179688:220506222050622205808747Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative gntR-family transcriptional regulator5e-0652
NC_009921:1611132:161877516187751619167393Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family4e-0652
NC_008278:1845000:185660018566001857508909Frankia alni ACN14a, complete genomePutative transcriptional regulator (GntR-family)5e-0651.6
NC_013446:3520500:3531889353188935332891401Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family6e-0651.6
NC_017328:2225418:222844922284492229195747Shigella flexneri 2002017 chromosome, complete genomeGntR family transcriptional regulator8e-0651.2
NC_003888:3602753:361362836136283614359732Streptomyces coelicolor A3(2), complete genomegntR-family regulator9e-0650.8
NC_015376:2061990:208370120837012084468768Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator1e-0550.8
NC_016114:3008500:302031030203103021026717Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator1e-0550.8