Pre_GI: BLASTP Hits

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Query: NC_007333:3244572:3256363 Thermobifida fusca YX, complete genome

Start: 3256363, End: 3256776, Length: 414

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:4960500:496857749685774968981405Thermomonospora curvata DSM 43183, complete genomeputative signal transduction histidine kinase2e-1684.7
NC_013595:9651019:966629696662969666874579Streptosporangium roseum DSM 43021, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase1e-1478.2
NC_013510:1614000:161761216176121618067456Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase6e-1476.3
NC_013929:3299736:334538933453893345784396Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-1270.1
NC_013510:5115500:513280551328055133197393Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-1269.7
NC_013510:2288746:230050923005092300937429Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase1e-1168.6
NC_013510:2432879:244682024468202447224405Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-1167.8
NC_013929:5248000:526022052602205260648429Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1167.8
NC_016582:10015558:1002419110024191100262512061Streptomyces bingchenggensis BCW-1 chromosome, complete genomemagnesium or manganese-dependent protein phosphatase3e-1167
NC_013510:1637730:165081716508171651311495Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase6e-1166.2
NC_016582:4874500:489774648977464898159414Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-1166.2
NC_013131:8480384:850365185036518504517867Catenulispora acidiphila DSM 44928, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase8e-1165.9
NC_003155:4592000:462227046222704622698429Streptomyces avermitilis MA-4680, complete genomeregulatory protein7e-1165.9
NC_013595:8338619:834591383459138346320408Streptosporangium roseum DSM 43021, complete genome9e-1165.5
NC_016111:2402891:241025224102522410653402Streptomyces cattleya NRRL 8057, complete genomeregulatory protein1e-1065.1
NC_013929:7663631:766876176687617669702942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1064.7
NC_013510:465188:486773486773487363591Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-0961.2
NC_018750:6588206:660790366079036608355453Streptomyces venezuelae ATCC 10712, complete genomeprobable regulatory protein3e-0960.5
NC_016109:4581467:459704245970424597479438Kitasatospora setae KM-6054, complete genomehypothetical protein8e-0959.3
NC_003888:4613000:462299346229934623433441Streptomyces coelicolor A3(2), complete genomeAbaA-like regulatory protein9e-0958.9
NC_018750:3859127:3872413387241338745302118Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0858.2
NC_015957:336500:344967344967345599633Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein4e-0856.6
NC_015953:3782302:378661337866133787212600Streptomyces sp. SirexAA-E chromosome, complete genomeputative signal transduction histidine kinase6e-0856.2
NC_016582:6999074:701240870124087013058651Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-0856.2
NC_018750:6950695:696932569693256969756432Streptomyces venezuelae ATCC 10712, complete genomeputative regulatory protein7e-0855.8
NC_016109:5290000:5311921531192153146922772Kitasatospora setae KM-6054, complete genomeputative protein kinase/phosphatase7e-0855.8
NC_003155:6295078:630453263045326305194663Streptomyces avermitilis MA-4680, complete genomehypothetical protein8e-0855.8
NC_014210:1588426:160158416015841602147564Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein2e-0755.1
NC_014210:4188448:419359141935914194154564Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,putative anti-sigma regulatory factor, serine/threonine protein kinase2e-0754.3
NC_003155:4906639:491429149142914914755465Streptomyces avermitilis MA-4680, complete genomeregulatory protein2e-0754.3
NC_016111:1546505:156117815611781561573396Streptomyces cattleya NRRL 8057, complete genomeRegulatory protein (fragment)6e-0752.8
NC_015957:115133:1151331151331177992667Streptomyces violaceusniger Tu 4113 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism8e-0752.4
NC_016109:5290000:5314849531484953173112463Kitasatospora setae KM-6054, complete genomeputative protein kinase/phosphatase9e-0752.4
NC_007333:1559321:156858815685881569025438Thermobifida fusca YX, complete genomehypothetical protein9e-0752.4
NC_015957:7249873:726567072656707266197528Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0652
NC_018750:5828000:5841875584187558445202646Streptomyces venezuelae ATCC 10712, complete genomeregulatory protein1e-0652
NC_007333:430000:437128437128437538411Thermobifida fusca YX, complete genomehypothetical protein1e-0651.6
NC_014210:5048502:506123850612385061732495Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,putative signal transduction histidine kinase2e-0651.2
NC_016582:3268857:327842832784283278868441Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0651.2
NC_016582:9551123:955554795555479555966420Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0651.2
NC_015953:5444572:5460375546037554629992625Streptomyces sp. SirexAA-E chromosome, complete genomeputative PAS/PAC sensor protein3e-0650.4
NC_013510:3065000:3084646308464630867122067Thermomonospora curvata DSM 43183, complete genomeprotein serine phosphatase with GAF(s) sensor(s)3e-0650.4
NC_013929:7278414:728643372864337286948516Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-0650.1
NC_016111:4613599:462047546204754620912438Streptomyces cattleya NRRL 8057, complete genomeregulatory protein (fragment)4e-0650.1
NC_016114:907500:922845922845923339495Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeATP-binding region ATPase domain-containing protein7e-0649.3
NC_010572:4505428:451288745128874513312426Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative regulatory protein containing a conserved C-terminal domain9e-0648.9