Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:336500 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
336851337621771hypothetical proteinBLASTP
3380803394861407protein serinethreonine phosphataseQuickGO ontologyBLASTP
3399153411051191peptidase M23QuickGO ontologyBLASTP
341263342207945aldoketo reductaseQuickGO ontologyBLASTP
342303342602300hypothetical proteinBLASTP
342824343618795Restriction endonuclease NgoMIVQuickGO ontologyBLASTP
343693343902210hypothetical proteinBLASTP
343902344747846helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
344967345599633hypothetical proteinBLASTP
345618346355738HNH endonucleaseQuickGO ontologyBLASTP
3465213476811161DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
347616348002387DNA mismatch endonuclease VsrQuickGO ontologyBLASTP
348097349092996Restriction endonuclease NaeIQuickGO ontologyBLASTP
349292350080789hypothetical proteinBLASTP
3501643514231260ErfKYbiSYcfSYnhG family proteinQuickGO ontologyBLASTP
351417352259843hypothetical protein
352252352833582ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
3528993548031905hypothetical proteinBLASTP
354867355682816tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
3561493573631215FAD dependent oxidoreductaseQuickGO ontologyBLASTP
3576383591011464hypothetical proteinBLASTP
3600483621352088asparagine synthaseQuickGO ontologyBLASTP