Pre_GI: BLASTP Hits

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Query: NC_004668:3184319:3207419 Enterococcus faecalis V583, complete genome

Start: 3207419, End: 3208306, Length: 888

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017316:2710021:272878127287812729668888Enterococcus faecalis OG1RF chromosome, complete genomecitrate (Pro-3S)-lyase1e-161568
NC_020291:4033000:404631340463134047212900Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecitrate lyase subunit beta5e-98357
NC_015389:616430:676665676665677579915Coriobacterium glomerans PW2 chromosome, complete genomecitrate lyase, beta subunit7e-96350
NC_014364:2322269:236357023635702364448879Spirochaeta smaragdinae DSM 11293 chromosome, complete genomecitrate lyase, beta subunit5e-94344
NC_004557:2607073:262093826209382621870933Clostridium tetani E88, complete genomecitrate lyase beta chain2e-85315
NC_015663:1:407140714952882Enterobacter aerogenes KCTC 2190 chromosome, complete genomecitrate lyase subunit beta1e-76286
NC_014632:336000:343401343401344297897Ilyobacter polytropus DSM 2926 chromosome, complete genomeCitrate (pro-3S)-lyase2e-61236
NC_009633:3457185:347878234787823479654873Alkaliphilus metalliredigens QYMF chromosome, complete genomecitryl-CoA lyase3e-60232
NC_014328:4387303:441233444123344413206873Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecitrate lyase subunit beta3e-59228
NC_004557:2711702:271862827186282719515888Clostridium tetani E88, complete genomecitrate lyase beta chain1e-56220
NC_014011:472650:474928474928475815888Aminobacterium colombiense DSM 12261 chromosome, complete genomeCitrate (pro-3S)-lyase1e-52206
NC_015578:3011133:302736930273693028244876Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase subunit beta (Citrase subunit beta) (Citrate(pro-3S)-lyase subunit beta) (Citryl-CoA lyase subunit)6e-52204
NC_013926:920279:930954930954931802849Aciduliprofundum boonei T469 chromosome, complete genomeCitrate (pro-3S)-lyase4e-46185
NC_008595:312861:334063334063334989927Mycobacterium avium 104, complete genomemalyl-CoA lyase1e-33144
NC_002944:292974:309902309902310828927Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-33143
NC_021064:303635:304515304515305387873Propionibacterium avidum 44067, complete genomeHpcH/HpaI aldolase/citrate lyase family protein3e-33142
NC_015675:6423000:643996164399616440860900Mesorhizobium opportunistum WSM2075 chromosome, complete genomeCitryl-CoA lyase5e-31135
NC_019973:5797000:581425058142505815149900Mesorhizobium australicum WSM2073, complete genomecitrate lyase beta subunit5e-31135
NC_014923:5868000:588529058852905886189900Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCitryl-CoA lyase5e-31135
NC_014664:2373451:238982523898252390694870Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeCitryl-CoA lyase8e-31134
NC_015593:2271097:228890822889082289762855Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeCitryl-CoA lyase5e-30131
NC_015593:2246352:225789022578902258801912Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeCitryl-CoA lyase1e-28127
NC_008025:316302:364565364565365398834Deinococcus geothermalis DSM 11300, complete genomeCitryl-CoA lyase5e-27121
NC_002754:1061851:107940710794071080216810Sulfolobus solfataricus P2, complete genomeCitryl-CoA lyase beta subunit homolog (citE)1e-26120
NC_007953:572926:579114579114579947834Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative HpcH/HpaI aldolase1e-26120
NC_014217:3431878:344524334452433446142900Starkeya novella DSM 506 chromosome, complete genomeCitrate (pro-3S)-lyase1e-26120
NC_017275:927814:943511943511944320810Sulfolobus islandicus HVE10/4 chromosome, complete genomecitryl-CoA lyase3e-26119
NC_018750:6869675:687870168787016879666966Streptomyces venezuelae ATCC 10712, complete genomeL-malyl-CoA or beta-methylmalyl-CoA lyase ,actinobacterial type1e-25117
NC_019673:895418:899599899599900558960Saccharothrix espanaensis DSM 44229 complete genomeCitryl-CoA lyase5e-25115
NC_015434:3581001:358392635839263584801876Verrucosispora maris AB-18-032 chromosome, complete genomeHpcH/HpaI aldolase3e-24112
NC_008268:361424:377711377711378688978Rhodococcus sp. RHA1, complete genomecitrate (pro-3S)-lyase beta subunit2e-23109
NC_003106:1786000:180354818035481804306759Sulfolobus tokodaii str. 7, complete genomehypothetical citrate lyase beta subunit2e-23109
NC_014926:165312:186590186590187558969Thermovibrio ammonificans HB-1 chromosome, complete genomeCitryl-CoA lyase4e-23108
NC_002928:3781657:379832937983293799216888Bordetella parapertussis 12822, complete genomeputative citrate lyase8e-23107
NC_020126:5470090:548428854842885485205918Myxococcus stipitatus DSM 14675, complete genomeputative citrate lyase subunit beta4e-22105
NC_009921:5400663:541024654102465411211966Frankia sp. EAN1pec, complete genomeCitryl-CoA lyase3e-21102
NC_010067:4418000:442217044221704423012843Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-20100
NC_016109:2629301:263776426377642638639876Kitasatospora setae KM-6054, complete genomeputative lyase6e-2098.2
NC_015727:1050500:106516510651651066073909Cupriavidus necator N-1 plasmid BB1p, complete sequencemalyl-CoA lyase Mcl1e-1997.1
NC_016932:1246235:125486012548601255762903Corynebacterium pseudotuberculosis 316 chromosome, complete genomecitrate lyase subunit beta-like protein2e-1893.2
NC_017986:5833819:586079958607995861614816Pseudomonas putida ND6 chromosome, complete genomecitrate lyase subunit beta1e-1790.1
NC_012207:2747599:276892427689242769745822Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative citrate (pro-3s)-lyase subunit beta2e-1789.7
NC_002945:2757821:277915227791522779973822Mycobacterium bovis AF2122/97, complete genomecitrate (Pro-3S)-lyase beta subunit2e-1789.7
NC_019950:2830682:285195328519532852774822Mycobacterium canettii CIPT 140060008 complete genomePutative citrate (pro-3S)-lyase (beta subunit) CitE (citrase) (citratase) (citritase) (citridesmolase) (citrase aldolase)2e-1789.7
NC_009525:2802987:282432328243232825144822Mycobacterium tuberculosis H37Ra, complete genomecitrate lyase subunit beta2e-1789.7
NC_009565:2806000:282567328256732826494822Mycobacterium tuberculosis F11, complete genomecitrate lyase beta subunit citE2e-1789.7
NC_008769:2754828:277615127761512776972822Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative citrate (pro-3s)-lyase subunit beta2e-1789.7
NC_015848:2859145:288041628804162881237822Mycobacterium canettii CIPT 140010059, complete genomeputative citrate (PRO-3S)-lyase subunit beta2e-1789.7
NC_002755:2788000:280784328078432808664822Mycobacterium tuberculosis CDC1551, complete genomecitrate lyase, beta subunit2e-1789.7
NC_000962:2791019:281235528123552813176822Mycobacterium tuberculosis H37Rv, complete genomePROBABLE CITRATE (PRO-3S)-LYASE (BETA SUBUNIT) CITE (CITRASE) (CITRATASE) (CITRITASE) (CITRIDESMOLASE) (CITRASE ALDOLASE)2e-1789.7
NC_016804:2735897:275551627555162756337822Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative citrate (Pro-3s)2e-1789.7
NC_017026:2786000:280599228059922806813822Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative citrate (PRO-3S)-lyase subunit beta2e-1789.7
NC_010623:1961685:203222320322232033032810Burkholderia phymatum STM815 chromosome 2, complete sequenceHpcH/HpaI aldolase4e-1789
NC_014329:1261480:127010712701071271009903Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein5e-1788.6
NC_016781:1261300:126992712699271270829903Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecitrate lyase subunit beta-like protein5e-1788.6
NC_017031:1261289:126991612699161270818903Corynebacterium pseudotuberculosis P54B96 chromosome, completecitrate lyase subunit beta-like protein5e-1788.6
NC_017300:1258861:126748812674881268390903Corynebacterium pseudotuberculosis 1002 chromosome, completecitrate lyase subunit beta-like protein5e-1788.6
NC_017301:1261167:126979412697941270696903Corynebacterium pseudotuberculosis C231 chromosome, completecitrate lyase subunit beta-like protein5e-1788.6
NC_017303:1261311:126993812699381270840903Corynebacterium pseudotuberculosis I19 chromosome, complete genomecitrate lyase subunit beta-like protein5e-1788.6
NC_017305:1258840:126746712674671268369903Corynebacterium pseudotuberculosis PAT10 chromosome, completecitrate lyase subunit beta-like protein5e-1788.6
NC_016111:6175975:618881261888126189672861Streptomyces cattleya NRRL 8057, complete genomecitrate lyase subunit beta5e-1788.6
NC_010803:1132500:114779211477921148739948Chlorobium limicola DSM 245, complete genomeHpcH/HpaI aldolase1e-1687.4
NC_009142:2480608:252045625204562521268813Saccharopolyspora erythraea NRRL 2338, complete genomecitrate lyase beta subunit2e-1686.7
NC_014323:3195178:319434831943483195181834Herbaspirillum seropedicae SmR1 chromosome, complete genomecitrate lyase beta subunit4e-1685.5
NC_017904:1683471:171164517116451712511867Mycobacterium sp. MOTT36Y chromosome, complete genomecitrate lyase1e-1584.3
NC_007963:3553678:356746935674693568293825Chromohalobacter salexigens DSM 3043, complete genomeHpcH/HpaI aldolase2e-1583.2
NC_009663:982048:100223610022361003153918Sulfurovum sp. NBC37-1, complete genomecitrate lyase beta chain1e-1480.9
NC_013947:1696671:1712598171259817136861089Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHpcH/HpaI aldolase2e-1377
NC_010557:679656:709748709748710632885Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceHpcH/HpaI aldolase4e-1272.4
NC_008392:1029134:104131810413181042202885Burkholderia cepacia AMMD chromosome 3, complete sequenceHpcH/HpaI aldolase5e-1272
NC_015259:485015:556198556198556992795Polymorphum gilvum SL003B-26A1 chromosome, complete genomeCitrate lyase, beta subunit, putative2e-1066.6
NC_009832:3313058:333047533304753331338864Serratia proteamaculans 568, complete genomeHpcH/HpaI aldolase2e-0860.1