Pre_GI: BLASTP Hits

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Query: NC_002506:324552:328018 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 328018, End: 328314, Length: 297

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:530835308353379297Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeplasmid stabilization system protein3e-52203
NC_016945:324519:327985327985328254270Vibrio cholerae IEC224 chromosome II, complete sequenceplasmid stabilization system protein2e-47187
NC_014828:541874:557523557523557798276Ethanoligenens harbinense YUAN-3 chromosome, complete genomeaddiction module toxin, RelE/StbE family2e-1788.2
NC_013316:2033906:205562320556232055913291Clostridium difficile R20291, complete genomeaddiction module toxin, rele/stbe family6e-1786.3
NC_017068:1852708:187315518731551873430276Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative addiction module toxin2e-1684.7
NC_015519:2526047:252604725260472526322276Tepidanaerobacter sp. Re1 chromosome, complete genomeRelE/StbE family addiction module toxin7e-1682.8
NC_002967:552000:558257558257558538282Treponema denticola ATCC 35405, complete genomehypothetical protein2e-1580.9
NC_011992:2279752:230373823037382304019282Acidovorax ebreus TPSY, complete genomeaddiction module toxin, RelE/StbE family6e-1579.7
NC_013165:1294000:129938412993841299665282Slackia heliotrinireducens DSM 20476, complete genomeaddiction module toxin, RelE/StbE family4e-1476.6
NC_016513:1400899:142004314200431420309267Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeaddiction module antitoxin1e-1375.1
NC_015385:1875671:190920219092021909492291Treponema succinifaciens DSM 2489 chromosome, complete genomeaddiction module toxin, RelE/StbE family2e-1374.3
NC_013416:1091432:110934811093481109614267Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaddiction module antitoxin/putative RelE toxin-like protein, plasmid stabilization system2e-1374.3
NC_011830:3786173:379952037995203799792273Desulfitobacterium hafniense DCB-2, complete genomeaddiction module toxin, RelE/StbE family4e-1373.2
NC_012846:1147000:116049611604961160777282Bartonella grahamii as4aup, complete genomeaddiction module toxin, RelE/StbE family7e-1372.8
NC_014355:399938:410359410359410628270Candidatus Nitrospira defluvii, complete genomerelE toxin8e-1372.4
NC_014355:399938:406481406481406750270Candidatus Nitrospira defluvii, complete genomerelE toxin9e-1372.4
NC_016630:434500:439306439306439584279Filifactor alocis ATCC 35896 chromosome, complete genometoxin-antitoxin system, toxin component, RelE family4e-1270.1
NC_011296:281930:283602283602283868267Thermodesulfovibrio yellowstonii DSM 11347, complete genomePZ12b4e-1270.1
NC_011662:2402408:242444224244422424690249Thauera sp. MZ1T, complete genomeaddiction module toxin, RelE/StbE family5e-1269.7
NC_015850:2048251:211943021194302119585156Acidithiobacillus caldus SM-1 chromosome, complete genomeaddiction module antitoxin1e-1168.9
NC_012846:986877:988774988774989034261Bartonella grahamii as4aup, complete genome2e-1167.8
NC_013216:426877:430949430949431197249Desulfotomaculum acetoxidans DSM 771, complete genome2e-1167.4
NC_015437:27325:733147331473592279Selenomonas sputigena ATCC 35185 chromosome, complete genomeaddiction module toxin, RelE/StbE family7e-1165.9
NC_009802:1977596:199350019935001993769270Campylobacter concisus 13826, complete genomeaddiction module toxin, RelE/StbE family2e-1064.7
NC_012846:1708840:172516417251641725415252Bartonella grahamii as4aup, complete genome3e-1063.5
NC_016830:381049:382794382794382997204Pseudomonas fluorescens F113 chromosome, complete genomeYafQ toxin protein6e-1062.8
NC_012560:1677798:169177216917721692050279Azotobacter vinelandii DJ, complete genomeplasmid stabilization system protein/addiction module toxin8e-1062.4
NC_021150:1677811:169178516917851692063279Azotobacter vinelandii CA6, complete genomeplasmid stabilization system protein/addiction module toxin8e-1062.4
NC_011498:448000:475560475560475841282Helicobacter pylori P12, complete genomehypothetical protein1e-0962
NC_010698:870312:896806896806897087282Helicobacter pylori Shi470, complete genomehypothetical protein1e-0962
NC_017358:220900:244607244607244888282Helicobacter pylori Cuz20 chromosome, complete genomehypothetical protein1e-0962
NC_017367:278916:301112301112301393282Helicobacter pylori F57, complete genomehypothetical protein1e-0962
NC_007384:278810:296108296108296386279Shigella sonnei Ss046, complete genomehypothetical protein1e-0962
NC_014555:1526775:155426615542661554547282Helicobacter pylori PeCan4 chromosome, complete genomehypothetical protein2e-0961.2
NC_017361:930280:956844956844957125282Helicobacter pylori SouthAfrica7 chromosome, complete genomehypothetical protein2e-0961.2
NC_017376:57500:835348353483815282Helicobacter pylori SNT49 chromosome, complete genomehypothetical protein2e-0960.8
NC_017379:1035464:104291710429171043198282Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein3e-0960.5