Query: NC_021182:4088000 Clostridium pasteurianum BC1, complete genome
Start: 4088000, End: 4111602, Length: 23603
Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_021182:434351 | 434351 | 454893 | 20543 | Clostridium pasteurianum BC1, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
NC_014328:1263139 | 1263139 | 1281861 | 18723 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_021182:2667408* | 2667408 | 2690110 | 22703 | Clostridium pasteurianum BC1, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_021182:162236* | 162236 | 184613 | 22378 | Clostridium pasteurianum BC1, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
NC_021182:93000* | 93000 | 144655 | 51656 | Clostridium pasteurianum BC1, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_021182:1045218 | 1045218 | 1063696 | 18479 | Clostridium pasteurianum BC1, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_021182:300415 | 300415 | 318731 | 18317 | Clostridium pasteurianum BC1, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_003997:1334000 | 1334000 | 1356204 | 22205 | Bacillus anthracis str. Ames, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_005945:1334000 | 1334000 | 1356099 | 22100 | Bacillus anthracis str. Sterne, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_006274:1367377 | 1367377 | 1390692 | 23316 | Bacillus cereus E33L, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_007530:1332768 | 1332768 | 1356099 | 23332 | Bacillus anthracis str. 'Ames Ancestor', complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_008600:1396471* | 1396471 | 1415113 | 18643 | Bacillus thuringiensis str. Al Hakam, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_012472:1339500 | 1339500 | 1357671 | 18172 | Bacillus cereus 03BB102, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014335:1329414* | 1329414 | 1352744 | 23331 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_010516:3466000 | 3466000 | 3488099 | 22100 | Clostridium botulinum B1 str. Okra, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_021182:1761789 | 1761789 | 1782079 | 20291 | Clostridium pasteurianum BC1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_021182:1983456 | 1983456 | 2005189 | 21734 | Clostridium pasteurianum BC1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_021182:4310900 | 4310900 | 4330180 | 19281 | Clostridium pasteurianum BC1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_021182:2422226* | 2422226 | 2447353 | 25128 | Clostridium pasteurianum BC1, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_021182:1009526 | 1009526 | 1033099 | 23574 | Clostridium pasteurianum BC1, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004722:1352000 | 1352000 | 1374318 | 22319 | Bacillus cereus ATCC 14579, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_021182:4602683* | 4602683 | 4627701 | 25019 | Clostridium pasteurianum BC1, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_021182:1245692 | 1245692 | 1263704 | 18013 | Clostridium pasteurianum BC1, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011772:1329730 | 1329730 | 1350552 | 20823 | Bacillus cereus G9842, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011898:426951* | 426951 | 466162 | 39212 | Clostridium cellulolyticum H10, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_021182:4882494 | 4882494 | 4908599 | 26106 | Clostridium pasteurianum BC1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021182:401129 | 401129 | 425262 | 24134 | Clostridium pasteurianum BC1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021182:2013500 | 2013500 | 2031600 | 18101 | Clostridium pasteurianum BC1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012225:1901656 | 1901656 | 1921143 | 19488 | Brachyspira hyodysenteriae WA1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015275:2712991* | 2712991 | 2732297 | 19307 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_021182:3525523* | 3525523 | 3566737 | 41215 | Clostridium pasteurianum BC1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_021182:966839 | 966839 | 984959 | 18121 | Clostridium pasteurianum BC1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010718:128423* | 128423 | 147424 | 19002 | Natranaerobius thermophilus JW/NM-WN-LF, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015499:1372361* | 1372361 | 1393164 | 20804 | Thermodesulfobium narugense DSM 14796 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |