Pre_GI: BLASTN Hits

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Query: NC_015410:2351464 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2351464, End: 2387511, Length: 36048

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome0975BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome3e-121444BLASTN svgBLASTP svg
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome2e-91345BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome2e-91345BLASTN svgBLASTP svg
NC_015563:6167512*6167512618907121560Delftia sp. Cs1-4 chromosome, complete genome1e-86329BLASTN svgBLASTP svg
NC_007347:24219422421942244414322202Ralstonia eutropha JMP134 chromosome 1, complete sequence1e-67266BLASTN svgBLASTP svg
NC_010002:1145951*1145951116748921539Delftia acidovorans SPH-1, complete genome2e-60242BLASTN svgBLASTP svg
NC_011992:392534*39253441503522502Acidovorax ebreus TPSY, complete genome1e-52216BLASTN svgBLASTP svg
NC_008782:401667*40166742183920173Acidovorax sp. JS42, complete genome3e-50208BLASTN svgBLASTP svg
NC_010995:2312901*2312901233336120461Cellvibrio japonicus Ueda107, complete genome9e-32147BLASTN svgBLASTP svg
NC_012691:2050957*2050957206859917643Tolumonas auensis DSM 9187, complete genome9e-29137BLASTN svgBLASTP svg
NC_002947:2589951*2589951263659946649Pseudomonas putida KT2440, complete genome3e-25125BLASTN svgBLASTP svg
NC_021150:37718603771860379427922420Azotobacter vinelandii CA6, complete genome1e-24123BLASTN svgBLASTP svg
NC_012560:37718613771861379428022420Azotobacter vinelandii DJ, complete genome1e-24123BLASTN svgBLASTP svg
NC_007908:4069150*4069150409259123442Rhodoferax ferrireducens T118, complete genome1e-18103BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome1e-18103BLASTN svgBLASTP svg
NC_013851:2317091*2317091233893321843Allochromatium vinosum DSM 180 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_007645:2204066*2204066222275718692Hahella chejuensis KCTC 2396, complete genome5e-18101BLASTN svgBLASTP svg
NC_020260:2725201*2725201275882333623Cronobacter sakazakii Sp291, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_008781:3508784*3508784353338924606Polaromonas naphthalenivorans CJ2, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015566:1206500*1206500124185935360Serratia sp. AS12 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015567:1206727*1206727124209935373Serratia sp. AS9 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_013282:12009931200993124927948287Cronobacter turicensis, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_003317:1263562*1263562128225718696Brucella melitensis 16M chromosome I, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_013173:16091231609123163199222870Desulfomicrobium baculatum DSM 4028, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_008347:1636660*1636660166438627727Maricaulis maris MCS10, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012526:157000*15700017910522106Deinococcus deserti VCD115, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012559:978419*978419100401325595Laribacter hongkongensis HLHK9, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013729:22878842287884231009922216Kribbella flavida DSM 17836, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_020064:1150982*1150982117040619425Serratia marcescens FGI94, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_009832:1280938*1280938130408723150Serratia proteamaculans 568, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_011894:2184956*2184956220848223527Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_007645:14432961443296146759924304Hahella chejuensis KCTC 2396, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010172:1522707*1522707154772725021Methylobacterium extorquens PA1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010505:43968004396800441651819719Methylobacterium radiotolerans JCM 2831, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010725:1419272*1419272148003860767Methylobacterium populi BJ001, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011757:1627698*1627698165391426217Methylobacterium chloromethanicum CM4, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014210:4122514*4122514414859926086Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1283.8BLASTN svgBLASTP svg
NC_015953:2349503*2349503238809938597Streptomyces sp. SirexAA-E chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020300:646500*64650066871022211Bartonella australis Aust/NH1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-1281.8BLASTN svgBLASTP svg
NC_010717:35649553564955358709922145Xanthomonas oryzae pv. oryzae PXO99A, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_020126:2883194*2883194290469121498Myxococcus stipitatus DSM 14675, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015975:1056731*1056731108723230502Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015638:1541346*1541346155913617791Lacinutrix sp. 5H-3-7-4 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013595:81621818162181819649034310Streptosporangium roseum DSM 43021, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str7e-1177.8BLASTN svgBLASTP svg
NC_014220:2037560*2037560205760220043Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_019978:1816940*1816940184397027031Halobacteroides halobius DSM 5150, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_016024:14724211472421149225919839Candidatus Chloracidobacterium thermophilum B chromosome chromosome7e-1177.8BLASTN svgBLASTP svg
NC_004631:23663352366335238728320949Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-1075.8BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011080:61042861042863159921172Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1075.8BLASTN svgBLASTP svg
NC_012779:30163273016327304089024564Edwardsiella ictaluri 93-146, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013446:1889500*1889500191816228663Comamonas testosteroni CNB-2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015422:3366500*3366500339127624777Alicycliphilus denitrificans K601 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_016048:3983500*3983500400235618857Oscillibacter valericigenes Sjm18-20, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_018524:557666*55766659660438939Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_003197:60604860604862559319546Salmonella typhimurium LT2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003198:598000*59800061851020511Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0973.8BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006511:2251022*2251022227421723196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-0973.8BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008261:2770468*2770468279579025323Clostridium perfringens ATCC 13124, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008262:2433979*2433979246848234504Clostridium perfringens SM101, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010102:24954412495441251396918529Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-0973.8BLASTN svgBLASTP svg
NC_011083:654479*65447967531220834Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-0973.8BLASTN svgBLASTP svg
NC_011149:58889558889560977120877Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0973.8BLASTN svgBLASTP svg
NC_012968:239476*23947626753528060Methylotenera mobilis JLW8, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008702:2039462*2039462206354724086Azoarcus sp. BH72, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012440:1841315*1841315186760426290Persephonella marina EX-H1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014830:335380*33538037339338014Intrasporangium calvum DSM 43043 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008380:2210649*2210649225616245514Rhizobium leguminosarum bv. viciae 3841, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014394:1658357*1658357168283924483Gallionella capsiferriformans ES-2 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_016002:17411091741109176553524427Pseudogulbenkiania sp. NH8B, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_016002:21799692179969220388623918Pseudogulbenkiania sp. NH8B, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_008542:1727000*1727000174809921100Burkholderia cenocepacia HI2424 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_011883:26949726949729312423628Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,7e-0867.9BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015275:566000*56600059144025441Clostridium lentocellum DSM 5427 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_020301:669000*66900071117642177Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_003902:3544743*3544743356478520043Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0765.9BLASTN svgBLASTP svg
NC_012440:1117510*1117510114123723728Persephonella marina EX-H1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013956:12075001207500123738329884Pantoea ananatis LMG 20103 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014011:962474*96247498859926126Aminobacterium colombiense DSM 12261 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014837:1144500*1144500117382529326Pantoea sp. At-9b chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015387:1278471*1278471129937220902Marinithermus hydrothermalis DSM 14884 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015663:2807574*2807574283616128588Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019815:782987*78298780605323067Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei3e-0765.9BLASTN svgBLASTP svg
NC_013757:1544348*1544348158219937852Geodermatophilus obscurus DSM 43160, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010080:445398*44539846977024373Lactobacillus helveticus DPC 4571, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008578:1827605*1827605185916131557Acidothermus cellulolyticus 11B, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006814:403723*40372344563241910Lactobacillus acidophilus NCFM, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_005061:647567*64756767214524579Candidatus Blochmannia floridanus, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013889:2603914*2603914262824624333Thioalkalivibrio sp. K90mix chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014724:439594*43959448564446051Lactobacillus amylovorus GRL 1112 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019897:26965872696587272049823912Thermobacillus composti KWC4 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018868:282738*28273830817025433Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018528:446610*44661047359926990Lactobacillus helveticus R0052 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015602:117939*11793915324635308Lactobacillus kefiranofaciens ZW3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015214:437733*43773348259944867Lactobacillus acidophilus 30SC chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014833:3444550*3444550347132026771Ruminococcus albus 7 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015856:3912195*3912195394272630532Collimonas fungivorans Ter331 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome4e-0661.9BLASTN svgBLASTP svg