Pre_GI Gene

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Host: NC_008542 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008542:1727000 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
172706317282201158Alkanesulfonate monooxygenaseQuickGO ontologyBLASTP
17282371729049813binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
17290461730005960ABC transporter relatedQuickGO ontologyBLASTP
17300631730278216Molybdenum-pterin bindingQuickGO ontologyBLASTP
17304211730618198hypothetical proteinBLASTP
17306741730919246hypothetical proteinBLASTP
173093817320351098TIM-barrel protein yjbN familyQuickGO ontologyBLASTP
1732090173216576tRNA-HisQuickGO ontology
17322541732511258phage-related integraseQuickGO ontologyBLASTP
17325511733174624hypothetical proteinBLASTP
17334161734312897Curculin domain protein mannose-binding lectinQuickGO ontologyBLASTP
17348811735693813Curculin domain protein mannose-binding lectinQuickGO ontologyBLASTP
17360771736400324C-5 cytosine-specific DNA methylaseQuickGO ontologyBLASTP
173657217376301059hypothetical proteinBLASTP
173797617390971122hypothetical proteinBLASTP
17397231740238516GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
17403311740795465hypothetical proteinBLASTP
17410981741493396hypothetical proteinBLASTP
17422621743005744protein of unknown function DUF1260QuickGO ontologyBLASTP
17431891743497309hypothetical proteinBLASTP
17435381743786249hypothetical proteinBLASTP
17438901744432543hypothetical proteinBLASTP
17445931745066474Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
17455601745787228hypothetical proteinBLASTP
17459321746555624phosphatidylserinephosphatidylglycerophosphate cardiolipin synthases like enzymeQuickGO ontologyBLASTP
17469001747388489transcriptional regulator HxlR familyQuickGO ontologyBLASTP
17475761748013438uncharacterized domain 1QuickGO ontologyBLASTP