Pre_GI: BLASTN Hits

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Query: NC_008542:1727000 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 1727000, End: 1748099, Length: 21100

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence028250BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence026700BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome6e-44186BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-41178BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome9e-34153BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome9e-34153BLASTN svgBLASTP svg
NC_013446:1889500*1889500191816228663Comamonas testosteroni CNB-2, complete genome2e-31145BLASTN svgBLASTP svg
NC_015422:3366500*3366500339127624777Alicycliphilus denitrificans K601 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_014500:2934232*2934232295717222941Dickeya dadantii 3937 chromosome, complete genome8e-31143BLASTN svgBLASTP svg
NC_014394:1658357*1658357168283924483Gallionella capsiferriformans ES-2 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_012968:239476*23947626753528060Methylotenera mobilis JLW8, complete genome1e-29139BLASTN svgBLASTP svg
NC_015856:3912195*3912195394272630532Collimonas fungivorans Ter331 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-27131BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome8e-25123BLASTN svgBLASTP svg
NC_020299:149118*14911816889819781Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete8e-25123BLASTN svgBLASTP svg
NC_012559:978419*978419100401325595Laribacter hongkongensis HLHK9, complete genome3e-24121BLASTN svgBLASTP svg
NC_012691:2050957*2050957206859917643Tolumonas auensis DSM 9187, complete genome5e-20107BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome3e-18101BLASTN svgBLASTP svg
NC_019815:782987*78298780605323067Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei3e-1591.7BLASTN svgBLASTP svg
NC_013851:2317091*2317091233893321843Allochromatium vinosum DSM 180 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014121:2745097*2745097276822023124Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete7e-1383.8BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014909:662500*66250068970227203Candidatus Blochmannia vafer str. BVAF chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:2589951*2589951263659946649Pseudomonas putida KT2440, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010501:18688881868888190527536388Pseudomonas putida W619, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_005061:647567*64756767214524579Candidatus Blochmannia floridanus, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016048:3983500*3983500400235618857Oscillibacter valericigenes Sjm18-20, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015410:2351464*2351464238751136048Pseudomonas mendocina NK-01 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007650:11923101192310122299130682Burkholderia thailandensis E264 chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014221:11672611167261118709119831Truepera radiovictrix DSM 17093 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013858:416000*41600045309937100Azospirillum sp. B510 plasmid pAB510d, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007347:24219422421942244414322202Ralstonia eutropha JMP134 chromosome 1, complete sequence1e-0560BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome1e-0560BLASTN svgBLASTP svg
NC_014365:2359760*2359760238225722498Desulfarculus baarsii DSM 2075 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_016023:18395031839503186209922597Bacillus coagulans 36D1 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome1e-0560BLASTN svgBLASTP svg
NC_003888:6103534*6103534615544651913Streptomyces coelicolor A3(2), complete genome1e-0560BLASTN svgBLASTP svg