Pre_GI: BLASTN Hits

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Query: NC_014323:5051041 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 5051041, End: 5076643, Length: 25603

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence0718BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence0704BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-147531BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome5e-119436BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome1e-94355BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome4e-92347BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete9e-90339BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome3e-77297BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome5e-76293BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome4e-73283BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome3e-65258BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-59236BLASTN svgBLASTP svg
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-56228BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome5e-54220BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete5e-54220BLASTN svgBLASTP svg
NC_009138:15839881583988160724223255Herminiimonas arsenicoxydans, complete genome9e-53216BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-51212BLASTN svgBLASTP svg
NC_007908:11084941108494116189953406Rhodoferax ferrireducens T118, complete genome8e-47196BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome1e-45192BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome1e-45192BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-45192BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome8e-44186BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome5e-42180BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome5e-39170BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome3e-37165BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-37165BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-36163BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome2e-35159BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence3e-34155BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome7e-32147BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-30141BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome2e-29139BLASTN svgBLASTP svg
NC_008095:55277075527707555977932073Myxococcus xanthus DK 1622, complete genome2e-29139BLASTN svgBLASTP svg
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome2e-29139BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome2e-29139BLASTN svgBLASTP svg
NC_015711:74715007471500749740725908Myxococcus fulvus HW-1 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome3e-28135BLASTN svgBLASTP svg
NC_008825:564392*56439259156627175Methylibium petroleiphilum PM1, complete genome4e-27131BLASTN svgBLASTP svg
NC_008543:25945025945028288823439Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4e-27131BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome2e-26129BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-25125BLASTN svgBLASTP svg
NC_010804:78222278222281165029429Burkholderia multivorans ATCC 17616 chromosome 1, complete4e-24121BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome6e-23117BLASTN svgBLASTP svg
NC_020126:6344827*6344827637873333907Myxococcus stipitatus DSM 14675, complete genome6e-23117BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome6e-23117BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome4e-21111BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome4e-21111BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome4e-21111BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome2e-19105BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome9e-19103BLASTN svgBLASTP svg
NC_015675:66518996651899667736225464Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-19103BLASTN svgBLASTP svg
NC_019973:60287956028795605165122857Mesorhizobium australicum WSM2073, complete genome9e-19103BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007511:30808493080849309968718839Burkholderia sp. 383 chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_005125:2366778*2366778239059123814Gloeobacter violaceus PCC 7421, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007722:85112985112987648525357Erythrobacter litoralis HTCC2594, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008391:22531882253188227809924912Burkholderia cepacia AMMD chromosome 2, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_009092:52151952151954593124413Shewanella loihica PV-4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_010552:29370329370332259928897Burkholderia ambifaria MC40-6 chromosome 2, complete sequence9e-1693.7BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence9e-1693.7BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012811:959725*95972598359923875Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010943:929492943752228229Stenotrophomonas maltophilia K279a, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002927:383760*38376040679123032Bordetella bronchiseptica RB50, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015565:28790028790033409146192Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete3e-1281.8BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007426:22480002248000227809930100Natronomonas pharaonis DSM 2160, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007494:71452571452574074926225Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_011886:2950411*2950411298659936189Arthrobacter chlorophenolicus A6, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015663:19348631934863195458219720Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020181:3518396*3518396354042322028Enterobacter aerogenes EA1509E, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014039:499233*49923352279623564Propionibacterium acnes SK137 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007948:4646344*4646344469438848045Polaromonas sp. JS666, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009138:51996551996554464624682Herminiimonas arsenicoxydans, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015222:52391552391554609922185Nitrosomonas sp. AL212 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010475:11610001161000118709026091Synechococcus sp. PCC 7002, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015573:29009062900906293080529900Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015589:36629636629639209925804Desulfotomaculum ruminis DSM 2154 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008319:13686313686316274425882Synechococcus sp. CC9311, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007777:25434752543475256518621712Frankia sp. CcI3, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006085:481231*48123150479923569Propionibacterium acnes KPA171202, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010498:41669034166903419347126569Escherichia coli SMS-3-5, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012913:1867276*1867276188866121386Aggregatibacter aphrophilus NJ8700, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015500:90080790080793036629560Treponema brennaborense DSM 12168 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020126:2299150*2299150232501225863Myxococcus stipitatus DSM 14675, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012811:139498*13949816287223375Methylobacterium extorquens AM1 megaplasmid, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007644:22055992205599223465329055Moorella thermoacetica ATCC 39073, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007517:16766041676604171020033597Geobacter metallireducens GS-15, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007298:219783*21978324447124689Dechloromonas aromatica RCB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018876:2563725*2563725258725423530Methanolobus psychrophilus R15 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014221:3175013*3175013320035525343Truepera radiovictrix DSM 17093 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_021184:59250159250161077518275Desulfotomaculum gibsoniae DSM 7213, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010995:45251194525119455888733769Cellvibrio japonicus Ueda107, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006396:1380882*1380882143692556044Haloarcula marismortui ATCC 43049 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002935:20596722059672207754417873Corynebacterium diphtheriae NCTC 13129, complete genome3e-0661.9BLASTN svgBLASTP svg