Pre_GI: BLASTN Hits

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Query: NC_012731:2739964 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 2739964, End: 2764925, Length: 24962

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome01594BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome01592BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome01592BLASTN svgBLASTP svg
NC_013716:31097003109700314990540206Citrobacter rodentium ICC168, complete genome01592BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome01174BLASTN svgBLASTP svg
NC_011740:4007000*4007000403180124802Escherichia fergusonii ATCC 35469, complete genome01086BLASTN svgBLASTP svg
NC_009649:948719487111709922229Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,01037BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome01023BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01015BLASTN svgBLASTP svg
NC_014121:1101093*1101093113435733265Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01015BLASTN svgBLASTP svg
NC_014121:10385541038554106077322220Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:31889283188928321328724360Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:45773244577324460113023807Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01013BLASTN svgBLASTP svg
NC_013508:2130681*2130681216209931419Edwardsiella tarda EIB202, complete genome0767BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete0696BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome4e-141509BLASTN svgBLASTP svg
NC_014500:40493844049384407390824525Dickeya dadantii 3937 chromosome, complete genome7e-112412BLASTN svgBLASTP svg
NC_020064:29603322960332298749027159Serratia marcescens FGI94, complete genome1e-54222BLASTN svgBLASTP svg
NC_010512:1196616*1196616122450027885Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence8e-47196BLASTN svgBLASTP svg
NC_008060:1544920*1544920156855223633Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence3e-43184BLASTN svgBLASTP svg
NC_008544:615448*61544864197226525Burkholderia cenocepacia HI2424 chromosome 3, complete sequence3e-43184BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome1e-42182BLASTN svgBLASTP svg
NC_009832:35000003500000352233422335Serratia proteamaculans 568, complete genome3e-31145BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-31145BLASTN svgBLASTP svg
NC_020181:3585898*3585898362589840001Enterobacter aerogenes EA1509E, complete genome1e-30143BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome4e-30141BLASTN svgBLASTP svg
NC_013510:22887462288746230946520720Thermomonospora curvata DSM 43183, complete genome2e-25125BLASTN svgBLASTP svg
NC_014216:28603422860342288514124800Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_012856:26338902633890266223728348Ralstonia pickettii 12D chromosome 1, complete genome6e-23117BLASTN svgBLASTP svg
NC_009778:2227627*2227627228586658240Enterobacter sakazakii ATCC BAA-894, complete genome4e-21111BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_013716:16182491618249164307824830Citrobacter rodentium ICC168, complete genome2e-19105BLASTN svgBLASTP svg
NC_010682:30336463033646306386630221Ralstonia pickettii 12J chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_010694:19666761966676198698720312Erwinia tasmaniensis, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007712:12625931262593129009927507Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:1712667*1712667173153718871Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:1954808*1954808197959924792Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:254000*25400027659922600Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:26499402649940266759917660Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:29780002978000300020322204Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome8e-1383.8BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-1281.8BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003552:11572941157294117654819255Methanosarcina acetivorans C2A, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014836:2848000*2848000287078522786Desulfurispirillum indicum S5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006361:31320003132000316145129452Nocardia farcinica IFM 10152, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014118:23696692369669239210922441Burkholderia sp. CCGE1002 chromosome chromosome 2, complete8e-1073.8BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013166:829868298611024727262Kangiella koreensis DSM 16069, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010067:14140001414000143680422805Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-0869.9BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_003143:18800001880000190232522326Yersinia pestis CO92, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005810:19760001976000199860722608Yersinia pestis biovar Microtus str. 91001, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007712:25235832523583254959926017Sodalis glossinidius str. 'morsitans', complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010159:29555622955562297845722896Yersinia pestis Angola, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011059:2272747*2272747229869125945Prosthecochloris aestuarii DSM 271, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015963:450045002599221493Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010572:6463939*6463939649468830750Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020210:1704500*1704500175948154982Geobacillus sp. GHH01, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg