Pre_GI: BLASTN Hits

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Query: NC_011750:955451 Escherichia coli IAI39 chromosome, complete genome

Start: 955451, End: 978769, Length: 23319

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002185:2347413*2347413237250325091Escherichia coli W, complete genome018060BLASTN svgBLASTP svg
CU928160:2239637*2239637226345123815Escherichia coli IAI1 chromosome, complete genome018050BLASTN svgBLASTP svg
NC_000913:2180855*2180855220193321079Escherichia coli K12, complete genome017820BLASTN svgBLASTP svg
AC_000091:2185369*2185369220724521877Escherichia coli W3110 DNA, complete genome017820BLASTN svgBLASTP svg
NC_010473:2267851*2267851229294125091Escherichia coli str. K-12 substr. DH10B, complete genome017810BLASTN svgBLASTP svg
NC_010468:1694729*1694729171759922871Escherichia coli ATCC 8739, complete genome017780BLASTN svgBLASTP svg
NC_009800:2225182*2225182224625921078Escherichia coli HS, complete genome017770BLASTN svgBLASTP svg
NC_007384:2251792*2251792227443422643Shigella sonnei Ss046, complete genome010810BLASTN svgBLASTP svg
NC_004741:2169877*2169877219012220246Shigella flexneri 2a str. 2457T, complete genome010350BLASTN svgBLASTP svg
NC_008258:2190635*2190635221013919505Shigella flexneri 5 str. 8401, complete genome08950BLASTN svgBLASTP svg
NC_004337:2185282*2185282220846123180Shigella flexneri 2a str. 301, complete genome08631BLASTN svgBLASTP svg
NC_002695:2854629*2854629287509920471Escherichia coli O157:H7 str. Sakai, complete genome08556BLASTN svgBLASTP svg
NC_002655:2925787*2925787294624420458Escherichia coli O157:H7 EDL933, complete genome08548BLASTN svgBLASTP svg
NC_011740:2220251*2220251224611525865Escherichia fergusonii ATCC 35469, complete genome03546BLASTN svgBLASTP svg
NC_009792:64288164288166509922219Citrobacter koseri ATCC BAA-895, complete genome02381BLASTN svgBLASTP svg
NC_020260:1111130*1111130113509923970Cronobacter sakazakii Sp291, complete genome01758BLASTN svgBLASTP svg
NC_009778:10700001070000109309923100Enterobacter sakazakii ATCC BAA-894, complete genome01750BLASTN svgBLASTP svg
NC_006511:79254379254382457832036Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC01156BLASTN svgBLASTP svg
NC_003198:21796882179688220742827741Salmonella enterica subsp. enterica serovar Typhi str. CT18,01140BLASTN svgBLASTP svg
NC_004631:79981079981083168931880Salmonella enterica subsp. enterica serovar Typhi Ty2, complete01140BLASTN svgBLASTP svg
NC_011149:21795922179592220743527844Salmonella enterica subsp. enterica serovar Agona str. SL483,01132BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str01132BLASTN svgBLASTP svg
NC_014121:34839763483976350876424789Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete0908BLASTN svgBLASTP svg
NC_015968:30535653053565307621422650Enterobacter asburiae LF7a chromosome, complete genome0827BLASTN svgBLASTP svg
NC_014500:14916601491660151533923680Dickeya dadantii 3937 chromosome, complete genome4e-70274BLASTN svgBLASTP svg
NC_015566:16592881659288170119441907Serratia sp. AS12 chromosome, complete genome6e-66260BLASTN svgBLASTP svg
NC_015061:19022511902251193341231162Rahnella sp. Y9602 chromosome, complete genome3e-52214BLASTN svgBLASTP svg
NC_014500:35197223519722353859918878Dickeya dadantii 3937 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome1e-33153BLASTN svgBLASTP svg
NC_013421:13978411397841141728819448Pectobacterium wasabiae WPP163, complete genome1e-29139BLASTN svgBLASTP svg
NC_006300:1624254*1624254164509920846Mannheimia succiniciproducens MBEL55E, complete genome1e-23119BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome1e-20109BLASTN svgBLASTP svg
NC_013592:33973043397304341695019647Dickeya dadantii Ech586, complete genome5e-20107BLASTN svgBLASTP svg
NC_009053:393700*39370041964225943Actinobacillus pleuropneumoniae L20, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007712:16014991601499163292631428Sodalis glossinidius str. 'morsitans', complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004088:15104671510467153309222626Yersinia pestis KIM, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006155:33333033333303335118117879Yersinia pseudotuberculosis IP 32953, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008149:14403711440371146301222642Yersinia pestis Nepal516, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010634:32508103250810326864117832Yersinia pseudotuberculosis PB1/+, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-1179.8BLASTN svgBLASTP svg
NC_012691:24140424140426512723724Tolumonas auensis DSM 9187, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015559:2434000*2434000245725923260Marinomonas posidonica IVIA-Po-181 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014315:2239725*2239725226027320549Nitrosococcus watsoni C-113 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg