Pre_GI: BLASTN Hits

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Query: NC_011244:213853 Borrelia recurrentis A1, complete genome

Start: 213853, End: 235706, Length: 21854

Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010673:205500*20550022759922100Borrelia hermsii DAH, complete genome0920BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome2e-22115BLASTN svgBLASTP svg
NC_008260:2340824*2340824238894248119Alcanivorax borkumensis SK2, complete genome5e-20107BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015436:1758257*1758257178406425808Spirochaeta coccoides DSM 17374 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002932:296557*29655731908122525Chlorobium tepidum TLS, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_002971:1545924*1545924156802322100Coxiella burnetii RSA 493, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009727:357206*35720637934622141Coxiella burnetii Dugway 7E9-12, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014166:2621500*2621500264777326274Arcobacter nitrofigilis DSM 7299 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013132:782846*78284680287020025Chitinophaga pinensis DSM 2588, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012673:1650139*1650139166872118583Exiguobacterium sp. AT1b, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012673:2368971*2368971238860519635Exiguobacterium sp. AT1b, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013722:31174423117442314053923098Xanthomonas albilineans, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014166:228293*22829324752319231Arcobacter nitrofigilis DSM 7299 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014166:2319447*2319447234446925023Arcobacter nitrofigilis DSM 7299 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014166:2649444*2649444267257623133Arcobacter nitrofigilis DSM 7299 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014166:3072703*3072703310034527643Arcobacter nitrofigilis DSM 7299 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NS_000191:782337*78233780392821592Uncultured Termite group 1 bacterium phylotype Rs-D17, complete1e-1179.8BLASTN svgBLASTP svg
NC_015497:37940003794000381999125992Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015152:2528399*2528399254787419476Spirochaeta sp. Buddy chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007799:727798*72779874909921302Ehrlichia chaffeensis str. Arkansas, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009465:90000*9000013018540186Candidatus Vesicomyosocius okutanii HA, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_019940:2236630*2236630225811121482Thioflavicoccus mobilis 8321 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_000919:74687574687576682819954Treponema pallidum subsp. pallidum str. Nichols, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007880:50840750840753094422538Francisella tularensis subsp. holarctica, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007912:909112*90911293451825407Saccharophagus degradans 2-40, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008369:51499551499553466619672Francisella tularensis subsp. holarctica OSU18, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010741:74535774535776827622920Treponema pallidum subsp. pallidum SS14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014915:3039639*3039639305859918961Geobacillus sp. Y412MC52 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014933:364463*36446338726722805Bacteroides helcogenes P 36-108 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015164:2078500*2078500209831619817Bacteroides salanitronis DSM 18170 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015634:3017564*3017564305008732524Bacillus coagulans 2-6 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015714:741044*74104476557024527Treponema paraluiscuniculi Cuniculi A chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020054:4795000*4795000481909924100Fibrella aestuarina BUZ 2 drat genome2e-1075.8BLASTN svgBLASTP svg
NC_020210:2969862*2969862300083330972Geobacillus sp. GHH01, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014041:661352*66135268452923178Zunongwangia profunda SM-A87 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014306:64215264215266635524204Erwinia billingiae Eb661, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015144:997587*997587102029322707Weeksella virosa DSM 16922 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020291:1389114*1389114141138222269Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0971.9BLASTN svgBLASTP svg
NC_014008:1463795*1463795148708323289Coraliomargarita akajimensis DSM 45221 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009850:1862602*1862602190488342282Arcobacter butzleri RM4018, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:40620004062000408523223233Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019904:3127945*3127945314866320719Echinicola vietnamensis DSM 17526 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011999:1633262*1633262165161518354Macrococcus caseolyticus JCSC5402, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010677:35383935383937621022372Francisella tularensis subsp. mediasiatica FSC147, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008601:1560482*1560482160300942528Francisella tularensis subsp. novicida U112, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008245:16257151625715164632420610Francisella tularensis subsp. tularensis FSC 198, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006582:4256915*4256915428739230478Bacillus clausii KSM-K16, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006570:16259091625909164817822270Francisella tularensis subsp. tularensis Schu 4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006322:4149500*4149500418760938110Bacillus licheniformis ATCC 14580, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004193:950000*95000096959919600Oceanobacillus iheyensis HTE831, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013205:2610956*2610956266117350218Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,4e-0867.9BLASTN svgBLASTP svg
NC_006270:4149004*4149004418759938596Bacillus licheniformis ATCC 14580, complete genome4e-0867.9BLASTN svgBLASTP svg
UCMB5137:276121*27612129641620296Bacillus atrophaeus UCMB-51374e-0867.9BLASTN svgBLASTP svg
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_015222:1905194*1905194192907923886Nitrosomonas sp. AL212 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014926:295988*29598832694930962Thermovibrio ammonificans HB-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014721:2012751*2012751203422421474Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000908:253979*25397927331819340Mycoplasma genitalium G37, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014499:181000*18100019859917600Candidatus Sulcia muelleri CARI chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015177:2642368*2642368266519022823Pedobacter saltans DSM 12145 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007798:703922*70392272789123970Neorickettsia sennetsu str. Miyayama, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013416:668152*66815269868530534Aggregatibacter actinomycetemcomitans D11S-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014387:719245*71924574009920855Butyrivibrio proteoclasticus B316 chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014935:918855*91885594271923865Nitratifractor saLSUginis DSM 16511 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018507:339000*33900036299924000Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018677:329829*32982935599926171Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_009434:796878*79687882874331866Pseudomonas stutzeri A1501, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008767:1829500*1829500185316723668Neisseria meningitidis FAM18, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003116:2063500*2063500208368920190Neisseria meningitidis Z2491, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010120:1814592*1814592183677422183Neisseria meningitidis 053442, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013166:194614*19461421572421111Kangiella koreensis DSM 16069, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013921:1977444*1977444203224454801Thermoanaerobacter italicus Ab9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014209:1910109*1910109194573835630Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_014376:4369666*4369666439393824273Clostridium saccharolyticum WM1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014376:6296*62963008623791Clostridium saccharolyticum WM1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014387:79808*7980810161621809Butyrivibrio proteoclasticus B316 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014614:2500301*2500301252659926299Clostridium sticklandii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014614:554949*55494957879923851Clostridium sticklandii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002946:1556000*1556000157831222313Neisseria gonorrhoeae FA 1090, complete genome3e-0661.9BLASTN svgBLASTP svg