Pre_GI Gene

Some Help

Host: NC_010673 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010673:205500 Borrelia hermsii DAH, complete genome

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2055902071341545hypothetical proteinBLASTP
207140207712573methyltransferaseQuickGO ontologyBLASTP
207771208604834UTP--glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
2086012103131713hypothetical proteinBLASTP
2103272121441818mucin 2 precursorQuickGO ontologyBLASTP
2121372144912355surface-located membrane protein 1QuickGO ontologyBLASTP
2144882163261839DNA mismatch repair protein MutLQuickGO ontologyBLASTP
2163472173871041hypothetical proteinBLASTP
217560218216657hypothetical proteinBLASTP
218194218772579protein translation elongation factor P EF-PQuickGO ontologyBLASTP
218838219743906phosphate-binding proteinQuickGO ontologyBLASTP
219826220734909phosphate transport system permease protein PstCQuickGO ontologyBLASTP
2207312222721542phosphate transport system permease protein PstAQuickGO ontologyBLASTP
222273223037765phosphate transport ATP-binding protein PstBQuickGO ontologyBLASTP
223038223859822zinc uptake transporterQuickGO ontologyBLASTP
2238982256791782alanyl-tRNA synthetaseQuickGO ontologyBLASTP
2256792269081230flagellar motor switch protein FliGQuickGO ontologyBLASTP
2268832275997176-phosphogluconolactonaseQuickGO ontologyBLASTP