Query: NC_010498:4899167 Escherichia coli SMS-3-5, complete genome
Start: 4899167, End: 4922745, Length: 23579
Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010468:4252940* | 4252940 | 4281599 | 28660 | Escherichia coli ATCC 8739, complete genome | 0 | 24960 | BLASTN svg | BLASTP svg |
NC_002695:5352554 | 5352554 | 5376639 | 24086 | Escherichia coli O157:H7 str. Sakai, complete genome | 0 | 24500 | BLASTN svg | BLASTP svg |
NC_002655:5382557 | 5382557 | 5406642 | 24086 | Escherichia coli O157:H7 EDL933, complete genome | 0 | 24500 | BLASTN svg | BLASTP svg |
NC_015663:2090442* | 2090442 | 2121273 | 30832 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 0 | 10310 | BLASTN svg | BLASTP svg |
NC_009801:4882684 | 4882684 | 4908245 | 25562 | Escherichia coli E24377A, complete genome | 0 | 1788 | BLASTN svg | BLASTP svg |
NC_009800:4529504* | 4529504 | 4548099 | 18596 | Escherichia coli HS, complete genome | 0 | 1786 | BLASTN svg | BLASTP svg |
NC_007613:4403070 | 4403070 | 4429295 | 26226 | Shigella boydii Sb227, complete genome | 0 | 1766 | BLASTN svg | BLASTP svg |
NC_011750:4978000 | 4978000 | 5000280 | 22281 | Escherichia coli IAI39 chromosome, complete genome | 0 | 1762 | BLASTN svg | BLASTP svg |
CP002185:4791811 | 4791811 | 4817790 | 25980 | Escherichia coli W, complete genome | 0 | 1731 | BLASTN svg | BLASTP svg |
CP002516:4199133 | 4199133 | 4228172 | 29040 | Escherichia coli KO11, complete genome | 0 | 1731 | BLASTN svg | BLASTP svg |
NC_008563:4905186 | 4905186 | 4923605 | 18420 | Escherichia coli APEC O1, complete genome | 0 | 1729 | BLASTN svg | BLASTP svg |
NC_008253:4817864 | 4817864 | 4862760 | 44897 | Escherichia coli 536, complete genome | 0 | 1729 | BLASTN svg | BLASTP svg |
NC_007946:4875997 | 4875997 | 4919696 | 43700 | Escherichia coli UTI89, complete genome | 0 | 1729 | BLASTN svg | BLASTP svg |
NC_004431:5123325 | 5123325 | 5149090 | 25766 | Escherichia coli CFT073, complete genome | 0 | 1386 | BLASTN svg | BLASTP svg |
NC_010498:4930649 | 4930649 | 4955919 | 25271 | Escherichia coli SMS-3-5, complete genome | 0 | 779 | BLASTN svg | BLASTP svg |
AC_000091:4534935 | 4534935 | 4559041 | 24107 | Escherichia coli W3110 DNA, complete genome | 0 | 771 | BLASTN svg | BLASTP svg |
NC_000913:4528278 | 4528278 | 4552384 | 24107 | Escherichia coli K12, complete genome | 0 | 771 | BLASTN svg | BLASTP svg |
NC_002695:5381576* | 5381576 | 5406118 | 24543 | Escherichia coli O157:H7 str. Sakai, complete genome | 0 | 771 | BLASTN svg | BLASTP svg |
NC_010473:4630361 | 4630361 | 4650148 | 19788 | Escherichia coli str. K-12 substr. DH10B, complete genome | 0 | 771 | BLASTN svg | BLASTP svg |
NC_011751:5070597 | 5070597 | 5089069 | 18473 | Escherichia coli UMN026 chromosome, complete genome | 0 | 771 | BLASTN svg | BLASTP svg |
NC_004741:4364235* | 4364235 | 4389643 | 25409 | Shigella flexneri 2a str. 2457T, complete genome | 0 | 755 | BLASTN svg | BLASTP svg |
NC_004337:4374500* | 4374500 | 4399099 | 24600 | Shigella flexneri 2a str. 301, complete genome | 0 | 755 | BLASTN svg | BLASTP svg |
CU928160:4570498* | 4570498 | 4615099 | 44602 | Escherichia coli IAI1 chromosome, complete genome | 0 | 751 | BLASTN svg | BLASTP svg |
NC_008258:4345400* | 4345400 | 4369898 | 24499 | Shigella flexneri 5 str. 8401, complete genome | 0 | 747 | BLASTN svg | BLASTP svg |
AP010958:5272863 | 5272863 | 5294599 | 21737 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 0 | 743 | BLASTN svg | BLASTP svg |
CP002797:4656327 | 4656327 | 4680716 | 24390 | Escherichia coli NA114, complete genome | 0 | 739 | BLASTN svg | BLASTP svg |
NC_013850:4829455* | 4829455 | 4859504 | 30050 | Klebsiella variicola At-22 chromosome, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
NC_010102:4745949* | 4745949 | 4768379 | 22431 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_015633:2801321 | 2801321 | 2825466 | 24146 | Vibrio anguillarum 775 chromosome chromosome I, complete sequence | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_006905:4638707* | 4638707 | 4672739 | 34033 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_004631:4687270* | 4687270 | 4710226 | 22957 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_011149:4677412 | 4677412 | 4712448 | 35037 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011080:4703266 | 4703266 | 4728765 | 25500 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014121:677799* | 677799 | 699898 | 22100 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
CP002185:4750571* | 4750571 | 4772512 | 21942 | Escherichia coli W, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014840:76232 | 76232 | 95834 | 19603 | Pantoea sp. At-9b plasmid pPAT9B03, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004603:370320 | 370320 | 395892 | 25573 | Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |