Pre_GI: BLASTN Hits

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Query: NC_009487:866000 Staphylococcus aureus subsp. aureus JH9 chromosome, complete

Start: 866000, End: 888257, Length: 22258

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: A series of isogenic methicillin-resistant (MRSA) strains were isolated from a patient undergoing vancomycin treatment. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002745:84084884084886459823751Staphylococcus aureus subsp. aureus N315, complete genome07085BLASTN svgBLASTP svg
NC_007350:1971762*1971762199495223191Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,01542BLASTN svgBLASTP svg
NC_011999:558057*55805758118523129Macrococcus caseolyticus JCSC5402, complete genome0783BLASTN svgBLASTP svg
NC_002952:88450088450090389519396Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-164587BLASTN svgBLASTP svg
NC_004461:277291*27729132456847278Staphylococcus epidermidis ATCC 12228, complete genome2e-111410BLASTN svgBLASTP svg
NC_004461:20020002002000202415522156Staphylococcus epidermidis ATCC 12228, complete genome2e-111410BLASTN svgBLASTP svg
NC_021175:59796859796862009922132Streptococcus oligofermentans AS 1.3089, complete genome9e-68266BLASTN svgBLASTP svg
NC_011772:4994500*4994500501209917600Bacillus cereus G9842, complete genome3e-61244BLASTN svgBLASTP svg
NC_007530:4853740*4853740487494821209Bacillus anthracis str. 'Ames Ancestor', complete genome3e-61244BLASTN svgBLASTP svg
NC_005945:4854951*4854951487414219192Bacillus anthracis str. Sterne, complete genome3e-61244BLASTN svgBLASTP svg
NC_003997:4852332*4852332487482222491Bacillus anthracis str. Ames, complete genome3e-61244BLASTN svgBLASTP svg
NC_004722:5027762*5027762504643418673Bacillus cereus ATCC 14579, complete genome8e-59236BLASTN svgBLASTP svg
NC_005957:4850659*4850659487309922441Bacillus thuringiensis serovar konkukian str. 97-27, complete8e-59236BLASTN svgBLASTP svg
NC_006274:4910465*4910465493271922255Bacillus cereus E33L, complete genome1e-57232BLASTN svgBLASTP svg
NC_014335:4800500*4800500481810917610Bacillus cereus biovar anthracis str. CI chromosome, complete2e-56228BLASTN svgBLASTP svg
NC_012472:4867210*4867210489813230923Bacillus cereus 03BB102, complete genome2e-56228BLASTN svgBLASTP svg
NC_008600:4868000*4868000488698318984Bacillus thuringiensis str. Al Hakam, complete genome2e-56228BLASTN svgBLASTP svg
NC_003909:4831000*4831000485077119772Bacillus cereus ATCC 10987, complete genome3e-55224BLASTN svgBLASTP svg
NC_010184:4879552*4879552489927119720Bacillus weihenstephanensis KBAB4, complete genome2e-53218BLASTN svgBLASTP svg
NC_007622:1558753*1558753157743218680Staphylococcus aureus RF122, complete genome3e-46194BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome2e-41178BLASTN svgBLASTP svg
NC_002953:14646931464693150259937907Staphylococcus aureus subsp. aureus MSSA476, complete genome6e-38167BLASTN svgBLASTP svg
NC_003923:14361391436139147709940961Staphylococcus aureus subsp. aureus MW2, complete genome6e-38167BLASTN svgBLASTP svg
NC_010079:14653561465356150892843573Staphylococcus aureus subsp. aureus USA300_TCH1516, complete1e-36163BLASTN svgBLASTP svg
NC_007795:13705001370500141025039751Staphylococcus aureus subsp. aureus NCTC 8325, complete genome1e-36163BLASTN svgBLASTP svg
NC_007793:14514091451409149409942691Staphylococcus aureus subsp. aureus USA300, complete genome1e-36163BLASTN svgBLASTP svg
NC_002951:14744651474465151709942635Staphylococcus aureus subsp. aureus COL, complete genome1e-36163BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-35159BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome4e-33151BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome6e-32147BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome3e-24121BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete1e-23119BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome2e-19105BLASTN svgBLASTP svg
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome2e-19105BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete2e-19105BLASTN svgBLASTP svg
NC_014829:3772914*3772914379159918686Bacillus cellulosilyticus DSM 2522 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_009782:15103961510396155316542770Staphylococcus aureus subsp. aureus Mu3, complete genome3e-18101BLASTN svgBLASTP svg
NC_002758:15089961508996155209943104Staphylococcus aureus subsp. aureus Mu50, complete genome3e-18101BLASTN svgBLASTP svg
NC_002745:14325851432585147535342769Staphylococcus aureus subsp. aureus N315, complete genome3e-18101BLASTN svgBLASTP svg
NC_008593:555463*55546357939123929Clostridium novyi NT, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002952:25505002550500257443923940Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015846:493388*49338851845425067Capnocytophaga canimorsus Cc5 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007622:1751500*1751500177342921930Staphylococcus aureus RF122, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010677:707881*70788173076722887Francisella tularensis subsp. mediasiatica FSC147, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010336:1468760*1468760149027221513Francisella philomiragia subsp. philomiragia ATCC 25017, complete7e-1383.8BLASTN svgBLASTP svg
NC_008245:1405000*1405000142332918330Francisella tularensis subsp. tularensis FSC 198, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007622:2239799*2239799227094331145Staphylococcus aureus RF122, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_006570:1405178*1405178142352318346Francisella tularensis subsp. tularensis Schu 4, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_005362:12898351289835130838518551Lactobacillus johnsonii NCC 533, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011999:53093053093055100020071Macrococcus caseolyticus JCSC5402, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020291:5641444*5641444566381622373Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004557:363628*36362838772724100Clostridium tetani E88, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007880:1079634*1079634110602826395Francisella tularensis subsp. holarctica, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008369:1083598*1083598110999126394Francisella tularensis subsp. holarctica OSU18, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008601:1404933*1404933142455519623Francisella tularensis subsp. novicida U112, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:25220002522000254434522346Oceanobacillus iheyensis HTE831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015638:429913*42991345655126639Lacinutrix sp. 5H-3-7-4 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019949:56942656942659846929044Mycoplasma cynos C142 complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006448:1568000*1568000159009922100Streptococcus thermophilus LMG 18311, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006448:465656*46565648850822853Streptococcus thermophilus LMG 18311, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006449:1572000*1572000159415422155Streptococcus thermophilus CNRZ1066, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008532:469888*46988849272322836Streptococcus thermophilus LMD-9, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009515:1409912*1409912146981159900Methanobrevibacter smithii ATCC 35061, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010184:4909183*4909183495059941417Bacillus weihenstephanensis KBAB4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014614:757381*75738178080323423Clostridium sticklandii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015167:2415604*2415604244614330540Cellulophaga lytica DSM 7489 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009089:3935500*3935500397916543666Clostridium difficile 630, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010674:31412283141228316494623719Clostridium botulinum B str. Eklund 17B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009004:2477220*2477220250009922880Lactococcus lactis subsp. cremoris MG1363, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007205:841818*84181886460622789Candidatus Pelagibacter ubique HTCC1062, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012925:14000014000016217622177Streptococcus suis P1/7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015945:708968*70896873426525298Muricauda ruestringensis DSM 13258 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013062:2162417*2162417218409921683Flavobacteriaceae bacterium 3519-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009785:21333921333923672823390Streptococcus gordonii str. Challis substr. CH1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021175:96422496422498616221939Streptococcus oligofermentans AS 1.3089, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015558:905227*90522793037825152Streptococcus parauberis KCTC 11537 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013192:107672*10767213303725366Leptotrichia buccalis DSM 1135, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013037:5263272*5263272529310829837Dyadobacter fermentans DSM 18053, complete genome3e-0661.9BLASTN svgBLASTP svg