Pre_GI Gene

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Host: NC_005362 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005362:1289835 Lactobacillus johnsonii NCC 533, complete genome

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
128983512911211287phosphopyruvate hydrataseQuickGO ontologyBLASTP
12912991291883585hypothetical proteinBLASTP
12925531293500948Lj928 prophage lysinQuickGO ontologyBLASTP
12935121293910399Lj928 prophage holinQuickGO ontology
12939101294122213Lj928 prophage proteinQuickGO ontology
12940971294318222Lj928 prophage proteinQuickGO ontology
12943861294787402Lj928 prophage proteinQuickGO ontology
129478912974672679Lj928 prophage proteinQuickGO ontologyBLASTP
12974481297840393Lj928 prophage proteinQuickGO ontology
129783313002232391Lj928 prophage proteinQuickGO ontologyBLASTP
13002231301032810Lj928 prophage proteinQuickGO ontologyBLASTP
130103213056664635Lj928 prophage proteinQuickGO ontologyBLASTP
13056661306007342Lj928 prophage proteinQuickGO ontology
13060311306411381Lj928 prophage minor tail proteinQuickGO ontology
13064691307038570Lj928 prophage proteinQuickGO ontologyBLASTP
13070521307429378Lj928 prophage proteinQuickGO ontology
13074991307777279Lj928 prophage major tail proteinQuickGO ontology
13077641308042279Lj928 prophage proteinQuickGO ontology
13080111308385375Lj928 prophage proteinQuickGO ontologyBLASTP