Pre_GI: BLASTN Hits

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Query: NC_009092:1599526 Shewanella loihica PV-4, complete genome

Start: 1599526, End: 1644864, Length: 45339

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome0724BLASTN svgBLASTP svg
NC_009831:35838563583856360600922154Shewanella sediminis HAW-EB3, complete genome9e-119436BLASTN svgBLASTP svg
NC_009831:36122063612206365403941834Shewanella sediminis HAW-EB3, complete genome1e-117432BLASTN svgBLASTP svg
NC_008577:15799501579950160290022951Shewanella sp. ANA-3 chromosome 1, complete sequence1e-111412BLASTN svgBLASTP svg
NC_014541:11659911165991120221836228Ferrimonas balearica DSM 9799 chromosome, complete genome1e-102383BLASTN svgBLASTP svg
NC_008322:1595500*1595500162859933100Shewanella sp. MR-7, complete genome4e-99371BLASTN svgBLASTP svg
NC_011566:15977511597751162783830088Shewanella piezotolerans WP3, complete genome5e-77297BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome3e-75291BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-73283BLASTN svgBLASTP svg
NC_021150:1258780*1258780127736818589Azotobacter vinelandii CA6, complete genome2e-70276BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome2e-70276BLASTN svgBLASTP svg
NC_008345:3394154*3394154341832224169Shewanella frigidimarina NCIMB 400, complete genome1e-65260BLASTN svgBLASTP svg
NC_010506:2046000*2046000208082534826Shewanella woodyi ATCC 51908, complete genome3e-44188BLASTN svgBLASTP svg
NC_009997:35831663583166360265419489Shewanella baltica OS195, complete genome5e-43184BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome5e-43184BLASTN svgBLASTP svg
NC_015633:41358741358744184328257Vibrio anguillarum 775 chromosome chromosome I, complete sequence3e-41178BLASTN svgBLASTP svg
NC_010473:29639512963951298843424484Escherichia coli str. K-12 substr. DH10B, complete genome5e-40174BLASTN svgBLASTP svg
NC_010468:1029471*1029471105499125521Escherichia coli ATCC 8739, complete genome5e-40174BLASTN svgBLASTP svg
NC_000913:28734432873443289220118759Escherichia coli K12, complete genome5e-40174BLASTN svgBLASTP svg
AC_000091:28720002872000289652624527Escherichia coli W3110 DNA, complete genome5e-40174BLASTN svgBLASTP svg
NC_010334:1783500*1783500181555632057Shewanella halifaxensis HAW-EB4, complete genome8e-39170BLASTN svgBLASTP svg
NC_009800:28899282889928291209922172Escherichia coli HS, complete genome1e-37167BLASTN svgBLASTP svg
NC_009052:33819433381943341170229760Shewanella baltica OS155, complete genome5e-37165BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome5e-37165BLASTN svgBLASTP svg
NC_007963:19089641908964193444325480Chromohalobacter salexigens DSM 3043, complete genome5e-37165BLASTN svgBLASTP svg
NC_016002:2946702*2946702299376147060Pseudogulbenkiania sp. NH8B, complete genome2e-36163BLASTN svgBLASTP svg
NC_013850:985331985331100742022090Klebsiella variicola At-22 chromosome, complete genome8e-36161BLASTN svgBLASTP svg
NC_007954:3171081*3171081321159940519Shewanella denitrificans OS217, complete genome8e-36161BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome1e-34157BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome1e-34157BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome1e-34157BLASTN svgBLASTP svg
NC_013166:96143196143198377922349Kangiella koreensis DSM 16069, complete genome3e-32149BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome3e-32149BLASTN svgBLASTP svg
NC_014012:16769831676983170572328741Shewanella violacea DSS12, complete genome2e-30143BLASTN svgBLASTP svg
NC_008321:1523323*1523323156037837056Shewanella sp. MR-4, complete genome1e-28137BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome4e-28135BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome4e-28135BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome4e-28135BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-28135BLASTN svgBLASTP svg
NC_007606:19998701999870202709927230Shigella dysenteriae Sd197, complete genome2e-27133BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-27133BLASTN svgBLASTP svg
NC_009901:1693500*1693500173209938600Shewanella pealeana ATCC 700345, complete genome3e-26129BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome1e-25127BLASTN svgBLASTP svg
NC_011083:22006132200613223455433942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-25127BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome2e-24123BLASTN svgBLASTP svg
NC_003198:21097752109775214492235148Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-23119BLASTN svgBLASTP svg
NC_004631:86200286200289659934598Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-23119BLASTN svgBLASTP svg
NC_006511:85478585478589509940315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-23119BLASTN svgBLASTP svg
NC_010102:86186086186089518233323Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-23119BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-23119BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome1e-22117BLASTN svgBLASTP svg
NC_014532:15794191579419162013440716Halomonas elongata DSM 2581, complete genome4e-22115BLASTN svgBLASTP svg
NC_008750:1659095*1659095168328224188Shewanella sp. W3-18-1, complete genome4e-22115BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome3e-20109BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_010468:17750001775000180518230183Escherichia coli ATCC 8739, complete genome6e-18101BLASTN svgBLASTP svg
NC_014666:40432794043279406262719349Frankia sp. EuI1c chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013416:16214691621469165023328765Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete1e-1697.6BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence4e-1695.6BLASTN svgBLASTP svg
NC_009778:11417161141716117336531650Enterobacter sakazakii ATCC BAA-894, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_014121:59866959866962384925181Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1489.7BLASTN svgBLASTP svg
NC_010002:5111665*5111665513441222748Delftia acidovorans SPH-1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015567:16604621660462170120640745Serratia sp. AS9 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_015566:16592881659288170119441907Serratia sp. AS12 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_008699:4443000*4443000447766734668Nocardioides sp. JS614, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_018419:22600022600024809922100Secondary endosymbiont of Ctenarytaina eucalypti chromosome,6e-1281.8BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome6e-1281.8BLASTN svgBLASTP svg
NC_007508:3925445*3925445394953524091Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_004603:23000023000025659726598Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete6e-1281.8BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008261:551513*55151357420222690Clostridium perfringens ATCC 13124, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1179.8BLASTN svgBLASTP svg
NC_020260:11841741184174121484630673Cronobacter sakazakii Sp291, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_004347:33039573303957332545721501Shewanella oneidensis MR-1, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_011059:18965931896593192809931507Prosthecochloris aestuarii DSM 271, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_014228:33538963353896338544531550Xenorhabdus nematophila ATCC 19061, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_020064:15475241547524158410636583Serratia marcescens FGI94, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_020302:2829484*2829484285153022047Corynebacterium halotolerans YIM 70093 = DSM 44683, complete1e-0973.8BLASTN svgBLASTP svg
NC_012704:19791831979183200242723245Corynebacterium kroppenstedtii DSM 44385, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008726:47253894725389475038925001Mycobacterium vanbaalenii PYR-1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012691:22250002225000224630921310Tolumonas auensis DSM 9187, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013947:1363078*1363078138138918312Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014562:20499212049921207971629796Pantoea vagans C9-1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010617:55895455895458907030117Kocuria rhizophila DC2201, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_013422:16041571604157162347719321Halothiobacillus neapolitanus c2, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_014306:2703544*2703544272704423501Erwinia billingiae Eb661, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009075:16387891638789165909920311Burkholderia pseudomallei 668 chromosome II, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011753:20617820617823311626939Vibrio splendidus LGP32 chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014318:73336887333688735759923912Amycolatopsis mediterranei U32 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020126:5777895*5777895579916621272Myxococcus stipitatus DSM 14675, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007347:76745576745579935531901Ralstonia eutropha JMP134 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014394:30367583036758307034433587Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_013508:2130681*2130681216209931419Edwardsiella tarda EIB202, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012917:15060831506083154696940887Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011666:1923776*1923776194844124666Methylocella silvestris BL2, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007929:16372611637261165608018820Lactobacillus salivarius subsp. salivarius UCC118, complete genome5e-0661.9BLASTN svgBLASTP svg