Pre_GI Gene

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Host: NC_010816 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010816:1852406 Bifidobacterium longum DJO10A, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
185240618535271122SalX-type ABC antimicrobial peptide transport system ATPase componentQuickGO ontologyBLASTP
185352418549301407SalY-type ABC antimicrobial peptide transport system permease componentQuickGO ontologyBLASTP
185537718575272151hypothetical proteinBLASTP
185752718587021176Putative O-acyltransferaseQuickGO ontologyBLASTP
18586621859003342hypothetical proteinBLASTP
18590581859465408TransposaseQuickGO ontologyBLASTP
18595331859793261hypothetical protein
18600531860211159hypothetical proteinBLASTP
186054318629482406Phosphoglycerol transferaseQuickGO ontologyBLASTP
18640191864963945Glycosyltransferase for cell wall membraneQuickGO ontologyBLASTP
186501218665111500Glucose-6-phosphate specific signal transduction histidine kinaseQuickGO ontologyBLASTP
186654918675711023dTDP-D-glucose 46-dehydrataseQuickGO ontologyBLASTP
186757918690301452dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
18691711870067897dTDP-glucose pyrophosphorylaseQuickGO ontologyBLASTP
187008018713991320Glycosyltransferase for cell wall membraneQuickGO ontologyBLASTP
187143718734372001Lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
18734441874292849ABC-type polysaccharidepolyol phosphate export systems permease componentQuickGO ontologyBLASTP
187429218755601269ABC-type polysaccharidepolyol phosphate transport system ATPase componentQuickGO ontologyBLASTP
187558518771081524GlycosyltransferaseQuickGO ontologyBLASTP
187713518794292295Phosphoglycerol transferaseQuickGO ontologyBLASTP
18795071879629123Phosphoglycerol transferaseQuickGO ontologyBLASTP