Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:3612206 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
361220636134891284polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
36138683614833966acetyltransferaseQuickGO ontologyBLASTP
36150843615755672Adenylyl-sulfate kinaseQuickGO ontologyBLASTP
361582536175521728TrkA-C domain proteinQuickGO ontologyBLASTP
361764936190581410Sulfate adenylyltransferaseQuickGO ontologyBLASTP
36192833620188906sulfate adenylyltransferase small subunitQuickGO ontologyBLASTP
36211093621258150hypothetical proteinBLASTP
362160536226631059dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
36228473623749903glycosyl transferase family 2QuickGO ontologyBLASTP
36237393624737999glycosyltransferase-like proteinQuickGO ontologyBLASTP
36251333625306174putative transposaseQuickGO ontologyBLASTP
36261883626886699hypothetical proteinBLASTP
362689536280791185hypothetical proteinBLASTP
36280793628921843hypothetical protein
36290033629995993NDP-sugar dehydratase or epimeraseQuickGO ontologyBLASTP
363010636316711566hypothetical proteinBLASTP
363166836328131146hypothetical proteinBLASTP
363284836339841137pyridoxal phosphate-dependent enzymeQuickGO ontologyBLASTP
363532236365181197hypothetical proteinBLASTP
36369313637755825hypothetical proteinBLASTP
36378233638818996hypothetical protein
363891736401881272hypothetical proteinBLASTP
36401883640970783hydrolase HAD superfamily-like proteinQuickGO ontologyBLASTP
36409873641877891glycosyl transferase family 2QuickGO ontologyBLASTP
36421913642604414rfbqrso22-4-like proteinQuickGO ontologyBLASTP
36427903643701912dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
36437473644292546dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
36443223645212891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
36452093645925717ABC transporter relatedQuickGO ontologyBLASTP
36459223646695774ABC-type polysaccharidepolyol phosphate export systems permease component-like proteinQuickGO ontologyBLASTP
36467053647073369hypothetical proteinBLASTP
36470803647787708glycosyl transferase family 2QuickGO ontologyBLASTP
364804236496641623hypothetical proteinBLASTP
364979336511361344hypothetical protein
365194936540392091Type II secretory pathway component PulD-like proteinQuickGO ontologyBLASTP