Pre_GI Gene

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Host: NC_010717 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010717:4626178 Xanthomonas oryzae pv. oryzae PXO99A, complete genome

Host Lineage: Xanthomonas oryzae; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain is a representative strain of race 6 isolated in the Philippines. This plant pathogen affects rice plants by causing leaf blight, a major problem in Asian countries where rice production occurs on an industrial scale. This organism enters the xylem and spreads throughout the vascular tissue of the plant, which results in wilting of the plant, or to leaf blight if the infection occurs later in development. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas oryzae contains two pathovars which cause enconomically significant diseases in rice. Xanthomonas oryzae pathovar oryzae causes bacterial leaf blight which is one of the most serious diseases of rice. This disease is common in temperate and tropical areas and can cause significant crop loss.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46256244626181558dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
46261784627065888glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
462712146281761056dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
46284024629148747electron transfer flavoprotein beta subunitQuickGO ontologyBLASTP
46291484630089942electron transfer flavoprotein alpha subunitQuickGO ontologyBLASTP
46303124631130819ABC transporterQuickGO ontologyBLASTP
463112046324331314ABC transporter ATP binding proteinQuickGO ontologyBLASTP
46325434632908366transposaseQuickGO ontologyBLASTP
46329634633958996IS1113 transposaseQuickGO ontologyBLASTP
46342014634341141hypothetical proteinBLASTP
463446346358451383ISXo8 transposaseQuickGO ontologyBLASTP
463586946369211053putative O-antigen acetylaseQuickGO ontologyBLASTP
463692746380901164putative glycosyl transferaseQuickGO ontologyBLASTP
46380814638269189hypothetical protein
463839246403171926putative glycosyltransferaseQuickGO ontologyBLASTP
464035046414261077sugar nucleotide epimerasedehydrataseQuickGO ontologyBLASTP
46412234641375153hypothetical protein
46414614642261801putative methyltransferaseQuickGO ontologyBLASTP
464230846435011194cystathionine gamma-synthase CGS O-succinylhomoserineThiol-lyaseQuickGO ontologyBLASTP
46434794643595117hypothetical protein
464359246449861395cystathionine beta-synthaseQuickGO ontologyBLASTP
46450594645190132hypothetical protein
46452044645422219UptFQuickGO ontologyBLASTP
46457644646654891outer membrane proteinQuickGO ontologyBLASTP
46466514647013363outer membran proteinQuickGO ontologyBLASTP
464713346482661134Tfp pilus assembly proteinQuickGO ontologyBLASTP
46486054649267663maleylacetoacetate isomeraseQuickGO ontologyBLASTP
46493114650306996fumarylacetoacetate hydrolaseQuickGO ontologyBLASTP
465068046520621383ATP-dependent RNA helicaseQuickGO ontologyBLASTP
46523344652513180spo0B-associated GTP-binding proteinQuickGO ontology
46524664652828363putative 6-pyruvoyl tetrahydrobiopterin synthaseQuickGO ontologyBLASTP