Pre_GI: BLASTN Hits

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Query: NC_007912:556000 Saccharophagus degradans 2-40, complete genome

Start: 556000, End: 579122, Length: 23123

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:23033572303357232709923743Saccharophagus degradans 2-40, complete genome01368BLASTN svgBLASTP svg
NC_007912:2958000*2958000298179823799Saccharophagus degradans 2-40, complete genome01134BLASTN svgBLASTP svg
NC_007912:52950052950055040220903Saccharophagus degradans 2-40, complete genome0878BLASTN svgBLASTP svg
NC_007912:4396972*4396972442110324132Saccharophagus degradans 2-40, complete genome0692BLASTN svgBLASTP svg
NC_007912:39213083921308393909917792Saccharophagus degradans 2-40, complete genome3e-160573BLASTN svgBLASTP svg
NC_012997:22540002254000228113427135Teredinibacter turnerae T7901, complete genome1e-122448BLASTN svgBLASTP svg
NC_012997:49064234906423494059934177Teredinibacter turnerae T7901, complete genome3e-40174BLASTN svgBLASTP svg
NC_012997:18207341820734187080550072Teredinibacter turnerae T7901, complete genome1e-36163BLASTN svgBLASTP svg
NC_012997:13359021335902135943323532Teredinibacter turnerae T7901, complete genome9e-31143BLASTN svgBLASTP svg
NC_005126:43337674333767439509961333Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-29139BLASTN svgBLASTP svg
NC_015061:38019273801927382632824402Rahnella sp. Y9602 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_011186:81982881982884300723180Vibrio fischeri MJ11 chromosome II, complete sequence3e-21111BLASTN svgBLASTP svg
NC_006841:75000075000077007720078Vibrio fischeri ES114 chromosome II, complete sequence1e-20109BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome8e-19103BLASTN svgBLASTP svg
NC_006300:60051660051663151030995Mannheimia succiniciproducens MBEL55E, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014541:643604*64360466816624563Ferrimonas balearica DSM 9799 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013166:24286324286326142618564Kangiella koreensis DSM 16069, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005362:550823*55082357585325031Lactobacillus johnsonii NCC 533, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006570:141966*14196617413932174Francisella tularensis subsp. tularensis Schu 4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007880:1667922*1667922168628518364Francisella tularensis subsp. holarctica, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008245:141982*14198217415532174Francisella tularensis subsp. tularensis FSC 198, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008260:29612912961291298426722977Alcanivorax borkumensis SK2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008369:1667437*1667437168579718361Francisella tularensis subsp. holarctica OSU18, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008601:1658454*1658454167712618673Francisella tularensis subsp. novicida U112, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009749:1663500*1663500168205118552Francisella tularensis subsp. holarctica FTA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010677:214712*21471224609931388Francisella tularensis subsp. mediasiatica FSC147, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006814:1618588*1618588164662328036Lactobacillus acidophilus NCFM, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004193:2342528*2342528236730224775Oceanobacillus iheyensis HTE831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013159:2913927*2913927293423220306Saccharomonospora viridis DSM 43017, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013161:18787001878700190383825139Cyanothece sp. PCC 8802, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011726:19115001911500193401122512Cyanothece sp. PCC 8801, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007576:471500*47150049611124612Lactobacillus sakei subsp. sakei 23K, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014106:1658103*1658103168286224760Lactobacillus crispatus ST1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009922:2721343*2721343276393542593Alkaliphilus oremlandii OhILAs, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019973:5716453*5716453575629339841Mesorhizobium australicum WSM2073, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015675:63421646342164638209939936Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014923:5787493*5787493583009942607Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete3e-0661.9BLASTN svgBLASTP svg