Pre_GI Gene

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Host: NC_008601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008601:1658454 Francisella tularensis subsp. novicida U112, complete genome

Host Lineage: Francisella tularensis; Francisella; Francisellaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: Avirulent species. Francisella novicida is closely related to Francisella tularensis, the causative agent for tularemia but is nonvirulent. This organism, however may cause disease in immunocompromised individuals. They do however cause a disease in mice that is very similar to tularemia. This strain was isolated from water in Utah, USA in 1950. Francisella tularensis is a non-motile, aerobic, rod-shaped Gram-negative bacterium and is the causative agent of tularemia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1658454165896351016S rRNA processing protein RimMQuickGO ontologyBLASTP
1659007165925524930S ribosomal protein S16QuickGO ontologyBLASTP
165954916607091161S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
166092016620861167fatty acid desaturaseQuickGO ontologyBLASTP
166220016632101011O-sialoglycoprotein endopeptidaseQuickGO ontologyBLASTP
16632101663446237hypothetical membrane proteinQuickGO ontologyBLASTP
166354916678024254DNA-directed RNA polymerase beta subunit160 kD subunitQuickGO ontologyBLASTP
166786416719404077DNA-directed RNA polymerase beta subunit140 kD subunitQuickGO ontologyBLASTP
1672094167247137850S ribosomal protein L7L12QuickGO ontologyBLASTP
1672534167305251950S ribosomal protein L10QuickGO ontologyBLASTP
1673222167391769650S ribosomal protein L1QuickGO ontologyBLASTP
1673920167435443550S ribosomal protein L11QuickGO ontologyBLASTP
16744231674956534transcription antitermination protein nusGQuickGO ontologyBLASTP
16749721675442471preprotein translocase subunit E membrane proteinQuickGO ontologyBLASTP
1675539167561476tRNA-TrpQuickGO ontology
167563416768181185elongation factor TuQuickGO ontologyBLASTP
1677042167712685tRNA-TyrQuickGO ontology