Pre_GI Gene

Some Help

Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:4396972 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
43969724398084111334-dihydroxy-2-butanone 4-phosphate synthaseGTP cyclohydrolase IIQuickGO ontologyBLASTP
43981094398771663Drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
439879243998891098Diaminohydroxyphosphoribosylaminopyrimidine deaminase 5-amino-6-5-phosphoribosylaminouracil reductaseQuickGO ontologyBLASTP
43999604400514555protein of unknown function DUF193QuickGO ontologyBLASTP
440065644017621107Amino acid adenylationQuickGO ontologyBLASTP
44019134402407495hypothetical protein
440252544036581134ISGsu4 transposaseQuickGO ontologyBLASTP
44041534404545393hypothetical protein
440468444057841101hypothetical proteinBLASTP
44063244407301978hypothetical proteinBLASTP
44076604408100441hypothetical proteinBLASTP
440844444106632220regulatory protein LuxRQuickGO ontologyBLASTP
44111074411403297hypothetical protein
44114244411909486tRNArRNA methyltransferase SpoU family proteinQuickGO ontologyBLASTP
441259344211038511hypothetical protein