Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:2958000 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29580432958789747hypothetical proteinBLASTP
29588702959289420hypothetical protein
29598922960410519hypothetical protein
29605372961115579hypothetical proteinBLASTP
29614672961781315hypothetical protein
29618032962165363hypothetical protein
29632582963602345hypothetical proteinBLASTP
296466329657031041hypothetical protein
29667852967168384hypothetical protein
29672912967740450Ig-like group 2QuickGO ontologyBLASTP
29683072968756450Formyltetrahydrofolate deformylaseQuickGO ontology
29688502969419570hypothetical protein
29694722969864393hypothetical proteinBLASTP
296994429711371194Arginyl-tRNA synthetase class IcQuickGO ontologyBLASTP
29716332972070438hypothetical proteinBLASTP
29731782973606429Helicase c2QuickGO ontologyBLASTP
29746492975149501Phospholipidglycerol acyltransferaseQuickGO ontology
29759352976546612response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
29768022977401600hypothetical protein
297775229795991848Aspartate carbamoyltransferaseQuickGO ontologyBLASTP
297961529817982184nitrate reductaseQuickGO ontologyBLASTP