Pre_GI Gene

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Host: NC_006814 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006814:1618588 Lactobacillus acidophilus NCFM, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161858816210152428leucyl-tRNA synthetaseQuickGO ontology
16212781621952675hypothetical proteinBLASTP
16219901622490501NADH dehydrogenaseQuickGO ontologyBLASTP
16225431623208666NADH dehydrogenaseQuickGO ontologyBLASTP
162377116252421472multidrug transporterQuickGO ontology
162525116264621212S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
1626607162667973tRNA-ValQuickGO ontology
1626685162675672tRNA-GluQuickGO ontology
16271931627345153putative transporterQuickGO ontology
16273151627452138putative transporterQuickGO ontologyBLASTP
1627662162775291tRNA-SerQuickGO ontology
1627764162783673tRNA-AsnQuickGO ontology
162784916279651175S ribosomal RNAQuickGO ontologyBLASTP
16279561631004304923S ribosomal RNAQuickGO ontologyBLASTP
16307401632557181823S ribosomal RNAQuickGO ontologyBLASTP
16326901634261157216S ribosomal RNAQuickGO ontologyBLASTP
163490116362211321seryl-tRNA synthetaseQuickGO ontology
16364351636986552ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
16369861637607622hypothetical protein
16377441638550807putative esteraseQuickGO ontologyBLASTP
16385531639410858putative regulatorQuickGO ontologyBLASTP
16394481639962515putative deoxyribosyltransferaseQuickGO ontology
164010816415021395NAD-dependent aldehyde dehydrogenaseQuickGO ontologyBLASTP
164163616466234988surface proteinQuickGO ontology