Query: NC_007492:2629350 Pseudomonas fluorescens PfO-1, complete genome
Start: 2629350, End: 2652665, Length: 23316
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_020209:2838582 | 2838582 | 2859365 | 20784 | Pseudomonas poae RE*1-1-14, complete genome | 0 | 1780 | BLASTN svg | BLASTP svg |
| NC_015556:1188500 | 1188500 | 1226026 | 37527 | Pseudomonas fulva 12-X chromosome, complete genome | 0 | 1330 | BLASTN svg | BLASTP svg |
| NC_007492:3655545 | 3655545 | 3686137 | 30593 | Pseudomonas fluorescens PfO-1, complete genome | 2e-136 | 494 | BLASTN svg | BLASTP svg |
| NC_012660:4669500 | 4669500 | 4689601 | 20102 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
| NC_015856:3675592* | 3675592 | 3700018 | 24427 | Collimonas fungivorans Ter331 chromosome, complete genome | 2e-96 | 361 | BLASTN svg | BLASTP svg |
| NC_007492:4310828 | 4310828 | 4337167 | 26340 | Pseudomonas fluorescens PfO-1, complete genome | 2e-72 | 281 | BLASTN svg | BLASTP svg |
| NC_009512:5166459 | 5166459 | 5193436 | 26978 | Pseudomonas putida F1, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
| NC_007974:1007834 | 1007834 | 1030359 | 22526 | Ralstonia metallidurans CH34 chromosome 2, complete sequence | 3e-49 | 204 | BLASTN svg | BLASTP svg |
| NC_007492:2771021 | 2771021 | 2802048 | 31028 | Pseudomonas fluorescens PfO-1, complete genome | 7e-44 | 186 | BLASTN svg | BLASTP svg |
| NC_002939:2844240* | 2844240 | 2876939 | 32700 | Geobacter sulfurreducens PCA, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
| NC_007492:2035761 | 2035761 | 2059553 | 23793 | Pseudomonas fluorescens PfO-1, complete genome | 8e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_011750:2928990* | 2928990 | 2969400 | 40411 | Escherichia coli IAI39 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_010498:2847359* | 2847359 | 2871659 | 24301 | Escherichia coli SMS-3-5, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_015733:3923800* | 3923800 | 3946797 | 22998 | Pseudomonas putida S16 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_004337:2747917* | 2747917 | 2770961 | 23045 | Shigella flexneri 2a str. 301, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_004741:2741971* | 2741971 | 2764223 | 22253 | Shigella flexneri 2a str. 2457T, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_007946:2931364 | 2931364 | 2950512 | 19149 | Escherichia coli UTI89, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_008563:2946391* | 2946391 | 2966672 | 20282 | Escherichia coli APEC O1, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010801:550270 | 550270 | 596634 | 46365 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_015733:864959* | 864959 | 899316 | 34358 | Pseudomonas putida S16 chromosome, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010087:319063 | 319063 | 367599 | 48537 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| AC_000091:2747520* | 2747520 | 2802148 | 54629 | Escherichia coli W3110 DNA, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| AP010958:3238742 | 3238742 | 3262137 | 23396 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| CU928160:2818750* | 2818750 | 2844902 | 26153 | Escherichia coli IAI1 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_000913:2746886* | 2746886 | 2801514 | 54629 | Escherichia coli K12, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007384:2933625* | 2933625 | 2957709 | 24085 | Shigella sonnei Ss046, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_010473:2839902* | 2839902 | 2889781 | 49880 | Escherichia coli str. K-12 substr. DH10B, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_006905:2857699 | 2857699 | 2899093 | 41395 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009720:3281000* | 3281000 | 3307049 | 26050 | Xanthobacter autotrophicus Py2, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011149:2829811 | 2829811 | 2852871 | 23061 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011757:39881* | 39881 | 74099 | 34219 | Methylobacterium chloromethanicum CM4, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| CP002185:2919752* | 2919752 | 2944610 | 24859 | Escherichia coli W, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_007005:4810295 | 4810295 | 4836677 | 26383 | Pseudomonas syringae pv. syringae B728a, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015379:6023926 | 6023926 | 6047280 | 23355 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014541:4167916 | 4167916 | 4192497 | 24582 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_007492:3954345 | 3954345 | 3998099 | 43755 | Pseudomonas fluorescens PfO-1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |