Pre_GI: BLASTP Hits

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Query: NC_018000:2964500:2964960 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 2964960, End: 2966228, Length: 1269

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011916:467106:4975844975844988551272Caulobacter crescentus NA1000 chromosome, complete genomeprotein hipA5e-115414
NC_012918:356019:3612303612303624741245Geobacter sp. M21 chromosome, complete genomeHipA N-terminal domain-containing protein8e-77287
NC_010677:1296000:1308129130812913094871359Francisella tularensis subsp. mediasiatica FSC147, complete genometranscription regulator3e-71269
NC_015850:736680:7505247505247517771254Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein HipA8e-57221
NC_020304:752012:7586387586387598941257Desulfocapsa sulfexigens DSM 10523, complete genomeHipA domain-containing protein1e-55217
NC_007954:334795:3419373419373432441308Shewanella denitrificans OS217, complete genomeHipA-like protein1e-46187
NC_014550:3534000:3534949353494935362351287Arthrobacter arilaitensis Re117, complete genomeHipA-like protein4e-43176
NC_015563:4583906:4597729459772945990361308Delftia sp. Cs1-4 chromosome, complete genomeHipA N-terminal domain-containing protein4e-43176
NC_014830:1602198:1611681161168116129581278Intrasporangium calvum DSM 43043 chromosome, complete genomeHipA N-terminal domain protein2e-41170
NC_015138:5046921:5051982505198250533041323Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHipA N-terminal domain-containing protein2e-41170
NC_012811:227541:2275412275412288871347Methylobacterium extorquens AM1 megaplasmid, complete sequenceHipA-like protein3e-39163
NC_009663:1656804:1660691166069116619771287Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-39163
NC_011593:2288993:2296387229638722977421356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,HipA domain-containing protein9e-39161
NC_017219:2292040:2296205229620522975601356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein9e-39161
NC_015566:547387:5553105553105566081299Serratia sp. AS12 chromosome, complete genomeHipA N-terminal domain-containing protein7e-39161
NC_015567:547500:5554965554965567941299Serratia sp. AS9 chromosome, complete genomeHipA N-terminal domain-containing protein7e-39161
NC_014246:876000:8813418813418828461506Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcriptional regulator7e-39161
NC_014973:4174668:4178934417893441802501317Geobacter sp. M18 chromosome, complete genomeHipA N-terminal domain-containing protein3e-38159
NC_017075:1:1110611106124491344Rubrivivax gelatinosus IL144, complete genomeHipA N-terminal domain-containing protein5e-38159
NC_021066:1393750:1414359141435914156901332Raoultella ornithinolytica B6, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator7e-38158
NC_008278:256427:2701312701312714291299Frankia alni ACN14a, complete genomeputative HipA protein.1e-37157
NC_013172:3093467:3093467309346730947021236Brachybacterium faecium DSM 4810, complete genomeHipA domain-containing protein6e-37155
NC_014965:997344:1023026102302610243541329Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHipA protein1e-36154
NC_011149:4677412:4692627469262746939551329Salmonella enterica subsp. enterica serovar Agona str. SL483,protein HipA2e-36154
NC_020181:3328844:3334219333421933357331515Enterobacter aerogenes EA1509E, complete genomeHipA protein5e-36152
NC_002696:2941644:2951498295149829528321335Caulobacter crescentus CB15, complete genomehypothetical protein4e-36152
NC_011916:2967624:2977478297747829788121335Caulobacter crescentus NA1000 chromosome, complete genomehipA-like phosphatidylinositol 3/4-kinase4e-36152
NC_007953:1434705:1439954143995414412881335Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein7e-36151
NC_009838:81913:8633986339876641326Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative capsule biosynthesis protein8e-36151
NC_013714:2086526:2137627213762721389281302Bifidobacterium dentium Bd1, complete genomeHipA protein1e-34147
NC_012792:627500:6376566376566390261371Variovorax paradoxus S110 chromosome 2, complete genomeHipA N-terminal domain protein8e-34145
CP002185:1681327:1703053170305317043751323Escherichia coli W, complete genomeregulator with HipB6e-34145
CP002516:2395578:2401473240147324027951323Escherichia coli KO11, complete genomeHipA N-terminal domain protein6e-34145
NC_016902:2395578:2401473240147324027951323Escherichia coli KO11FL chromosome, complete genomeHipA N-terminal domain-containing protein6e-34145
NC_020063:2230000:2255666225566622569791314Enterobacteriaceae bacterium strain FGI 57, complete genomeHipA domain-containing protein6e-34145
NC_004459:2025436:2039667203966720409951329Vibrio vulnificus CMCP6 chromosome I, complete sequenceHipA-like protein4e-34145
NC_010468:2345781:2351690235169023530121323Escherichia coli ATCC 8739, complete genomeHipA N-terminal domain protein1e-33144
NC_010473:1661000:1678503167850316798251323Escherichia coli str. K-12 substr. DH10B, complete genomeregulator with hipB1e-33144
AC_000091:1574000:1592568159256815938901323Escherichia coli W3110 DNA, complete genomeregulator with hipB1e-33144
NC_000913:1570431:1588878158887815902001323Escherichia coli K12, complete genomeregulator with hipB1e-33144
NC_009800:1589000:1607677160767716089991323Escherichia coli HS, complete genomeprotein HipA1e-33144
NC_012759:1462490:1480937148093714822591323Escherichia coli BW2952 chromosome, complete genomeregulator with hipB1e-33144
NC_012947:2228235:2232110223211022334321323Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeHipA N-terminal domain protein1e-33144
NC_012967:1546000:1567421156742115687431323Escherichia coli B str. REL606 chromosome, complete genomeregulator with hipB1e-33144
NC_011741:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB6e-33142
CU928160:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB6e-33142
NC_011742:1574036:1591112159111215924341323Escherichia coli S88 chromosome, complete genomeregulator with hipB7e-33141
NC_015633:2565753:2582282258228225836011320Vibrio anguillarum 775 chromosome chromosome I, complete sequenceHipA2e-32140
NC_004347:718091:7233087233087246091302Shewanella oneidensis MR-1, complete genomehypothetical protein3e-32139
CP002797:1591000:1604080160408016053811302Escherichia coli NA114, complete genomeHipA protein6e-32138
NC_008322:641197:6499886499886512591272Shewanella sp. MR-7, complete genomeHipA domain protein1e-31137
NC_007384:1696831:1696831169683116981521322Shigella sonnei Ss046, complete genome1e-31137
NC_012668:160357:1663781663781676971320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein2e-31136
NC_012668:1623350:1644773164477316460921320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein2e-31136
NC_012668:2258854:2281544228154422828631320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein2e-31136
NC_012586:897148:8971488971488984041257Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceHipA-like protein4e-31135
NC_009092:521519:5361395361395374401302Shewanella loihica PV-4, complete genomeHipA domain protein6e-31135
NC_016631:4688000:4709199470919947104401242Granulicella mallensis MP5ACTX8 chromosome, complete genomeHipA N-terminal domain-containing protein7e-29128
NC_014323:4665610:4695226469522646965451320Herbaspirillum seropedicae SmR1 chromosome, complete genomeHipA domain-containing protein3e-27123
NC_014216:3003347:3003347300334730045641218Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeHipA N-terminal domain protein3e-27122
NC_014151:3797861:3803799380379938050371239Cellulomonas flavigena DSM 20109 chromosome, complete genomeHipA N-terminal domain protein6e-26119
NC_007722:851129:8721938721938734071215Erythrobacter litoralis HTCC2594, complete genomeputative Uncharacterized protein related to capsule biosynthesisenzyme4e-25116
NC_014355:1461355:1478780147878014799851206Candidatus Nitrospira defluvii, complete genomeputative serine kinase HipA1e-22107
NC_002655:1966464:1972050197205019730721023Escherichia coli O157:H7 EDL933, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator2e-22107
NC_016901:4039335:4048914404891440501761263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein3e-21103
NC_009997:4091371:4100950410095041022121263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein3e-21103
NC_009665:2219082:2232566223256622338281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein4e-21102
NC_010338:426388:4428394428394441311293Caulobacter sp. K31, complete genomeHipA domain protein8e-21102
NC_009665:3984080:3994654399465439959161263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein3e-20100
NC_009665:3869904:3884666388466638859281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein6e-2099
NC_016901:3936944:3947523394752339487851263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein3e-1997.1
NC_009997:3988980:3999559399955940008211263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein3e-1997.1
NC_011750:1849561:186943618694361870125690Escherichia coli IAI39 chromosome, complete genome4e-1996.3
NC_015635:3542125:3555796355579635569981203Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1687
NC_015703:3880903:388915138891513890095945Runella slithyformis DSM 19594 chromosome, complete genomeHipA domain-containing protein1e-1378.2
NC_009337:715500:759958759958760914957Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeHipA domain-containing protein1e-1378.2
NC_008609:251608:2608462608462621381293Pelobacter propionicus DSM 2379, complete genomeHipA domain protein1e-1377.8
NC_002678:5714000:5715623571562357168851263Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-1377.8
NC_010814:294394:2995142995143008061293Geobacter lovleyi SZ, complete genomeHipA domain protein2e-1377.4
NC_013940:137713:1545131545131557901278Deferribacter desulfuricans SSM1 megaplasmid pDF308, completehypothetical protein3e-1376.6
NC_007575:973559:9792989792989808811584Sulfurimonas denitrificans DSM 1251, complete genomeHipA-like-like4e-1376.6
NC_014006:2932959:2937186293718629390391854Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein2e-1274.3
NC_009943:1043210:1047736104773610489651230Candidatus Desulfococcus oleovorans Hxd3, complete genomeHipA domain protein2e-1273.9
NC_009614:4565620:456562045656204566549930Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein7e-1272
NC_014371:1218813:122696512269651227912948Prevotella melaninogenica ATCC 25845 chromosome chromosome II,toxin-antitoxin system, toxin component, HipA family1e-1171.6
NC_010815:40357:4453344533457441212Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceHipA N-terminal domain protein2e-1170.5
NC_017515:1744500:1807574180757418088271254Neisseria meningitidis M04-240196 chromosome, complete genomehipA family protein2e-1170.5
NC_009648:5119271:513174551317455132260516Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1170.1
NC_017516:1755500:1810100181010018113531254Neisseria meningitidis H44/76 chromosome, complete genomehipA family protein3e-1170.1
NC_003112:1824196:1839835183983518410881254Neisseria meningitidis MC58, complete genomehypothetical protein3e-1170.1
NC_009720:622262:6269526269526288141863Xanthobacter autotrophicus Py2, complete genomeHipA domain-containing protein6e-1168.9
NC_009439:4404942:4411796441179644131301335Pseudomonas mendocina ymp, complete genomeHipA domain-containing protein1e-1067.8
NC_017518:1843705:1859343185934318605961254Neisseria meningitidis NZ-05/33 chromosome, complete genomehipA family protein1e-1067.8
NC_017514:446616:4906874906874919761290Neisseria meningitidis M01-240149 chromosome, complete genomehipA family protein1e-1067.8
NC_017517:1807072:1820414182041418217031290Neisseria meningitidis M01-240355 chromosome, complete genomehipA family protein2e-1067.8
NC_002939:2617037:2631147263114726323101164Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-1067.4
NC_017505:1783476:1802221180222118035101290Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein2e-1067.4
NC_002929:52500:5924959249604751227Bordetella pertussis Tohama I, complete genomehypothetical protein5e-1065.9
NC_017223:51180:5924959249604751227Bordetella pertussis CS chromosome, complete genomehypothetical protein5e-1065.9
NC_002928:507749:5543395543395555291191Bordetella parapertussis 12822, complete genomehypothetical protein6e-1065.5
NC_015850:761500:7644577644577657341278Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein1e-0964.3
NC_010725:3961981:3965622396562239669291308Methylobacterium populi BJ001, complete genomeHipA domain protein3e-0963.2
NC_016609:7608723:7622598762259876238781281Niastella koreensis GR20-10 chromosome, complete genomeHipA domain-containing protein4e-0963.2
NC_015711:2050360:2056597205659720577931197Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein8e-0962
NC_015410:3209954:3216219321621932174151197Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein2e-0860.5
NC_016803:2431672:2455849245584924570991251Desulfovibrio desulfuricans ND132 chromosome, complete genomeHipA domain-containing protein2e-0860.5
NC_009663:1656804:1663154166315416643711218Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-0860.1
NC_009665:2352528:2362631236263123638931263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein4e-0859.7
NC_018691:1822731:1827564182756418287721209Alcanivorax dieselolei B5 chromosome, complete genomeHipA protein5e-0859.3
NC_006513:881120:8831788831788844101233Azoarcus sp. EbN1, complete genomehypothetical protein6e-0858.9
NC_019973:5694620:5696342569634256976281287Mesorhizobium australicum WSM2073, complete genomecapsule biosynthesis enzymes related protein1e-0758.5
NC_015675:6276357:6322053632205363233391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeHipA domain-containing protein1e-0758.5
NC_014923:5765660:5767382576738257686681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeHipA domain protein1e-0758.5
NC_009138:1544835:1556009155600915572291221Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-0757.4
NC_008786:738791:7504987504987518711374Verminephrobacter eiseniae EF01-2, complete genomeHipA domain protein2e-0757
NC_009832:622969:630242630242630592351Serratia proteamaculans 568, complete genomehypothetical protein6e-0755.8
NC_009434:695582:7081477081477093431197Pseudomonas stutzeri A1501, complete genomehypothetical protein8e-0755.5
NC_002927:506183:5545445545445558391296Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-0655.1
NC_008253:1534840:155134915513491552221873Escherichia coli 536, complete genomehypothetical protein HipA3e-0653.5
NC_015733:2963548:2977407297740729786001194Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-0652.8