Pre_GI: BLASTP Hits

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Query: NC_017986:5867782:5881998 Pseudomonas putida ND6 chromosome, complete genome

Start: 5881998, End: 5883338, Length: 1341

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:2782000:2793078279307827944181341Pseudomonas putida F1, complete genomeamino acid permease-associated region0834
NC_016614:1543333:1562996156299615643391344Vibrio sp. EJY3 chromosome 2, complete sequenceputrescine transporter2e-165582
NC_013508:275081:2913392913392926341296Edwardsiella tarda EIB202, complete genomeputrescine transport protein9e-118424
NC_020063:2785652:2795382279538227967071326Enterobacteriaceae bacterium strain FGI 57, complete genomeputrescine:ornithine antiporter, APA family6e-117421
NC_015424:4251369:4259132425913242604661335Aeromonas veronii B565 chromosome, complete genomeamino acid permease superfamily1e-111403
NC_012779:305969:312154312154313143990Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-94347
NC_010067:3247169:3268853326885332701901338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-59229
NC_004459:2025436:2050577205057720519141338Vibrio vulnificus CMCP6 chromosome I, complete sequenceCadaverine/lysine antiporter2e-43177
NC_014965:997344:1035756103575610370931338Vibrio vulnificus MO6-24/O chromosome I, complete sequencelysine/cadaverine antiporter membrane protein CadB2e-43177
NC_008253:334467:3485133485133498231311Escherichia coli 536, complete genomeamino acid permease2e-43177
NC_013361:5319497:5324994532499453263281335Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine/cadaverine antiporter2e-42173
CP002797:4411763:4434911443491144362451335Escherichia coli NA114, complete genomeLysine/cadaverine antiporter membrane protein CadB2e-42173
NC_010468:4252940:4274436427443642757701335Escherichia coli ATCC 8739, complete genomearginine/ornithine antiporter2e-42173
NC_021066:4177217:4184900418490041862521353Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease6e-42172
NC_004741:4364235:4383674438367443847261053Shigella flexneri 2a str. 2457T, complete genome1e-40167
NC_016614:1543333:1565362156536215666991338Vibrio sp. EJY3 chromosome 2, complete sequenceamino acid transporter permease6e-39162
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein8e-33141
NC_021066:4177217:418768141876814188283603Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease4e-21102
NC_010793:721944:7407807407807420631284Orientia tsutsugamushi str. Ikeda, complete genomeamino acid transporter2e-1997.4
NC_015410:2258800:2258800225880022602271428Pseudomonas mendocina NK-01 chromosome, complete genomearginine/ornithine antiporter2e-1790.9
NC_016641:5808113:5834570583457058359851416Paenibacillus terrae HPL-003 chromosome, complete genomearginine/ornithine antiporter4e-1789.4
NC_015391:2059191:2059191205919120606181428Carnobacterium sp. 17-4 chromosome, complete genomearginine/ornithine antiporter4e-1789.4
NC_018604:789575:7934247934247947071284Brachyspira pilosicoli WesB complete genomeamino acid permease3e-1480.1
NC_014330:2026193:2030006203000620313251320Brachyspira pilosicoli 95/1000 chromosome, complete genomeamino acid permease3e-1480.1
NC_009512:2782000:279684927968492797604756Pseudomonas putida F1, complete genomeprotein of unknown function DUF395, YeeE/YedE4e-1479.7
NC_019908:1225690:1237862123786212391451284Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamino acid permease4e-1479.7
NC_020829:5174354:5224533522453352259811449Pseudomonas denitrificans ATCC 13867, complete genomearginine/ornithine antiporter8e-1478.6
NC_017179:1239991:1257859125785912591721314Clostridium difficile BI1, complete genomeamino acid permease6e-1375.9
NC_013315:1230214:1248081124808112493941314Clostridium difficile CD196 chromosome, complete genomeamino acid permease6e-1375.9
NC_013316:1225797:1245698124569812470111314Clostridium difficile R20291, complete genomeputative amino acid permease6e-1375.9
NC_014364:2904443:2914718291471829161121395Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeamino acid permease-associated region1e-1274.7
NC_012214:1974500:2006813200681320082071395Erwinia pyrifoliae Ep1/96, complete genomePutative arginine/ornithine antiporter YdgI4e-1273.2
NC_018607:662697:6666196666196678271209Brachyspira pilosicoli B2904 chromosome, complete genomeamino acid permease7e-1272.4
NC_014150:3085013:3089069308906930903521284Brachyspira murdochii DSM 12563 chromosome, complete genomeamino acid permease-associated region7e-1272.4
NC_013971:1927510:1930022193002219314131392Erwinia amylovora ATCC 49946 chromosome, complete genomearginine/ornithine antiporter8e-1272
NC_013961:1891000:1892495189249518938861392Erwinia amylovora, complete genomeputative APA family amino acid transporter8e-1272
NC_011742:4655373:4672710467271046741791470Escherichia coli S88 chromosome, complete genomemembrane protein1e-1171.6
NC_008563:4739333:4758048475804847595171470Escherichia coli APEC O1, complete genomeputative antiporter1e-1171.6
NC_004431:4270305:4288246428824642897151470Escherichia coli CFT073, complete genomePutative antiporter1e-1171.6
NC_009348:2034500:2038628203862820400641437Aeromonas salmonicida subsp. salmonicida A449, complete genomearginine/ornithine antiporter4e-1169.7
NC_017387:1110412:1112344111234411136781335Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomearginine/ornithine antiporter1e-0964.7
NC_007296:1762000:1772812177281217741551344Streptococcus pyogenes MGAS6180, complete genomeamino acid permease5e-0962.8
NC_014121:4577324:4585647458564745870231377Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeArginine/ornithine antiporter9e-0962
NC_017292:834749:8367278367278381871461Chlamydophila psittaci 02DC15 chromosome, complete genomearginine/ornithine antiporter1e-0862
NC_017291:829577:8339408339408354001461Chlamydophila psittaci C19/98 chromosome, complete genomeamino acid permease1e-0862
NC_017289:834781:8367598367598382191461Chlamydophila psittaci 01DC11 chromosome, complete genomearginine/ornithine antiporter1e-0862
NC_015470:831863:8362268362268376861461Chlamydophila psittaci 6BC chromosome, complete genomearginine/ornithine antiporter1e-0862
NC_008463:4342119:4342119434211943435371419Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable amino acid permease6e-0859.3
NC_011770:4542183:4542183454218345436011419Pseudomonas aeruginosa LESB58, complete genomeputative amino acid permease9e-0858.5
NC_008347:174000:1935451935451948761332Maricaulis maris MCS10, complete genomeamino acid permease-associated region4e-0756.6
NC_015737:2691246:2693255269325526946671413Clostridium sp. SY8519, complete genomeamino acid transporter7e-0755.8
NC_004431:4270305:4284198428419842856971500Escherichia coli CFT073, complete genomePutative amino acid antiporter3e-0653.9
NC_008563:4739333:4762066476206647635651500Escherichia coli APEC O1, complete genomeputative amino acid antiporter3e-0653.9
NC_009922:944538:9461849461849475631380Alkaliphilus oremlandii OhILAs, complete genomeamino acid permease-associated region5e-0652.8
NC_016584:5625975:5646726564672656480841359Desulfosporosinus orientis DSM 765 chromosome, complete genomeamino acid transporter5e-0652.8
NC_004741:2526421:2536123253612325375831461Shigella flexneri 2a str. 2457T, complete genomeputative amino acid antiporter5e-0652.8
NC_008258:2542863:2552467255246725539271461Shigella flexneri 5 str. 8401, complete genomeputative amino acid antiporter5e-0652.8
NC_004337:2548288:2557990255799025594501461Shigella flexneri 2a str. 301, complete genomeputative amino acid antiporter5e-0652.8
NC_017328:2586171:2595628259562825970881461Shigella flexneri 2002017 chromosome, complete genomeputative amino acid antiporter5e-0652.8
NC_007509:3668:5295152951545521602Burkholderia sp. 383 chromosome 3, complete sequenceputative amino acid transporter5e-0652.8
NC_016857:4573173:4593839459383945951011263Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74inner membrane protein YjeH8e-0652.4
NC_017046:4571833:4592499459249945937611263Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease8e-0652.4
NC_006905:4486433:4507958450795845091991242Salmonella enterica subsp. enterica serovar Choleraesuis strputative transporter, cytoplasmic membrane protein7e-0652.4
NC_003197:4551880:4573257457325745744981242Salmonella typhimurium LT2, complete genomeputative transporter7e-0652.4
NC_016810:4573172:4593838459383845950791242Salmonella enterica subsp. enterica serovar Typhimurium strputative permease7e-0652.4
NC_016856:4563435:4586088458608845873291242Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinner membrane protein YjeH7e-0652.4
NC_011205:4564645:4585770458577045870321263Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-0652.4