Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:2782000 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
278203627842342199aldehyde oxidase and xanthine dehydrogenase molybdopterin bindingQuickGO ontologyBLASTP
278423127852321002molybdopterin dehydrogenase FAD-bindingQuickGO ontologyBLASTP
278522927857565282Fe-2S-binding domain proteinQuickGO ontologyBLASTP
278585527876421788thiamine pyrophosphate enzyme TPP binding domain proteinQuickGO ontologyBLASTP
27877912788309519Uncharacterized protein containing double-stranded beta helix domainQuickGO ontologyBLASTP
27883522788732381hypothetical proteinBLASTP
27888332789351519hypothetical proteinBLASTP
27895542790537984Integral membrane protein TerCQuickGO ontologyBLASTP
27908612791274414Class I peptide chain release factorQuickGO ontologyBLASTP
27915332791895363hypothetical proteinBLASTP
27921212793029909extracellular solute-binding protein family 3QuickGO ontologyBLASTP
279307827944181341amino acid permease-associated regionQuickGO ontologyBLASTP
27964192796847429protein of unknown function DUF395 YeeEYedEQuickGO ontologyBLASTP
27968492797604756protein of unknown function DUF395 YeeEYedEQuickGO ontologyBLASTP
279771627988971182sodiumhydrogen exchangerQuickGO ontologyBLASTP
27992132799785573phosphoribosyltransferaseQuickGO ontologyBLASTP
27997872800665879UspA domain proteinQuickGO ontologyBLASTP
28008842801774891UspA domain proteinQuickGO ontologyBLASTP
280193628042182283heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP