Pre_GI: BLASTP Hits

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Query: NC_017362:992293:1005512 Helicobacter pylori Lithuania75 chromosome, complete genome

Start: 1005512, End: 1006171, Length: 660

Host Lineage: Helicobacter pylori; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). It was only recently discovered (1983) by two Australians (Warren and Marshall) that this organism was associated with peptic ulcers. It is one of the most common chronic infectious organisms, and is found in half the world's population. This organism attacks the gastric epithilial surface, resulting in chronic gastritis, and can cause more severe diseases including those that lead to gastric carcinomas and lymphomas, peptic ulcers, and severe diarrhea. It is an extracellular pathogen that persists in the gastric environment, which has a very low pH, by production of the urease enzyme, which converts urea to ammonia and carbon dioxide, a process which can counteract the acidic environment by production of a base. The toxins include cytolethal distending toxin, vacuolating cytotoxin (VacA) that induces host epithelial cell apopoptosis (cell death), and the cytotoxin associated antigen (CagA) which results in alteration to the host cell signalling pathways. The CagA protein is translocated into host cells by a type IV secretion system encoded by the cag pathogenicity island.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012973:967380:983229983229983873645Helicobacter pylori B38 chromosome, complete genomehypothetical protein1e-110398
NC_017378:986611:100392110039211004559639Helicobacter pylori Puno120 chromosome, complete genomephage/colicin/tellurite resistance cluster protein TerY3e-109394
NC_017379:996500:101383510138351014473639Helicobacter pylori Puno135 chromosome, complete genomephage/colicin/tellurite resistance cluster protein TerY1e-106385
NC_010002:4572573:460170546017054602439735Delftia acidovorans SPH-1, complete genomevon Willebrand factor type A1e-24112
NC_010170:4463000:449229744922974493031735Bordetella petrii, complete genomehypothetical protein2e-24112
NC_010170:4409683:442306744230674423618552Bordetella petrii, complete genomehypothetical protein9e-2097.1
NC_008757:111292:129168129168129890723Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completevon Willebrand factor, type A9e-1993.6
NC_013410:2691437:270688927068892707599711Fibrobacter succinogenes subsp. succinogenes S85 chromosome,von Willebrand factor type A2e-1479.3
NC_017265:3821890:383903038390303839668639Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative tellurium resistance protein6e-0857.4
NC_005810:3238391:323906532390653239703639Yersinia pestis biovar Microtus str. 91001, complete genomeputative tellurium resistance protein1e-0756.6
NC_004088:3955933:397366839736683974306639Yersinia pestis KIM, complete genomehypothetical protein1e-0756.6
NC_010634:4045794:406277840627784063416639Yersinia pseudotuberculosis PB1/+, complete genomevon Willebrand factor type A1e-0756.6
NC_010159:1101241:111941911194191120057639Yersinia pestis Angola, complete genomeputative tellurium resistance protein1e-0756.6
NC_003143:645559:646233646233646871639Yersinia pestis CO92, complete genomeputative tellurium resistance protein1e-0756.6
NC_006155:4105542:412252641225264123164639Yersinia pseudotuberculosis IP 32953, complete genomeputative tellurium resistance protein1e-0756.6
NC_008150:3529430:354656935465693547207639Yersinia pestis Antiqua, complete genomeputative tellurium resistance protein1e-0756.6
NC_009381:427515:428189428189428827639Yersinia pestis Pestoides F chromosome, complete genometellurium resistance protein1e-0756.6
NC_009708:588102:589416589416590054639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometellurium resistance protein1e-0756.6
NC_014029:699078:699752699752700390639Yersinia pestis Z176003 chromosome, complete genomeputative tellurium resistance protein1e-0756.6
NC_017154:640578:641892641892642530639Yersinia pestis D106004 chromosome, complete genomeputative tellurium resistance protein1e-0756.6
NC_017160:643406:644080644080644718639Yersinia pestis D182038 chromosome, complete genomeputative tellurium resistance protein1e-0756.6
NC_017168:438785:456979456979457617639Yersinia pestis A1122 chromosome, complete genomeputative tellurium resistance protein1e-0756.6
NC_009925:2533547:255106725510672551729663Acaryochloris marina MBIC11017, complete genomevon Willebrand factor type A domain protein, putative1e-0653.5
NC_014117:442616:473903473903474580678Burkholderia sp. CCGE1002 chromosome chromosome 1, completevon Willebrand factor type A2e-0653.1
NC_020126:2979959:299141729914172992088672Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-0652