Pre_GI: BLASTP Hits

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Query: NC_017218:1655009:1676060 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1676060, End: 1676455, Length: 396

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014169:1784435:181122018112201811615396Bifidobacterium longum subsp. longum JDM301 chromosome, completeRbsD/FucU transport family protein3e-62236
NC_013721:1581370:159709915970991597494396Gardnerella vaginalis 409-05, complete genomeRbsD/FucU transport family protein5e-43172
NC_014039:15236:222032220322586384Propionibacterium acnes SK137 chromosome, complete genomeRibose ABC transport system, high affinity permease RbsD5e-24109
NC_006085:15246:222142221422597384Propionibacterium acnes KPA171202, complete genomehigh affinity ribose transport protein RbsD1e-23108
NC_016511:15100:220682206822451384Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeD-ribose pyranase2e-23107
NC_016512:15102:220702207022453384Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeD-ribose pyranase2e-23107
NC_016516:15102:220702207022453384Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeD-ribose pyranase2e-23107
NC_018665:2163713:218550121855012185890390Exiguobacterium antarcticum B7 chromosome, complete genomeD-ribose pyranase2e-1891.3
NC_010556:2328303:234760123476012347990390Exiguobacterium sibiricum 255-15, complete genomeRbsD or FucU transport1e-1788.2
NC_013205:2332174:234225723422572342652396Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,RbsD or FucU transport3e-1787
NC_006274:659922:672436672436672831396Bacillus cereus E33L, complete genomeribose ABC transporter, permease4e-1787
NC_011772:647778:655881655881656276396Bacillus cereus G9842, complete genomeribose ABC transporter protein6e-1786.3
NC_017208:671128:680051680051680446396Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeD-ribose pyranase6e-1786.3
NC_004722:650950:657537657537657932396Bacillus cereus ATCC 14579, complete genomeHigh affinity ribose transport protein rbsD6e-1785.9
NC_010184:661226:669170669170669565396Bacillus weihenstephanensis KBAB4, complete genomeRbsD or FucU transport6e-1785.9
NC_016771:701909:711761711761712156396Bacillus cereus NC7401, complete genomeribose ABC transporter protein7e-1785.9
NC_011969:726369:733401733401733796396Bacillus cereus Q1 chromosome, complete genomed-ribose pyranase7e-1785.9
NC_013521:107937:112705112705113088384Sanguibacter keddieii DSM 10542, complete genomeABC-type ribose transport system, auxiliary component8e-1785.9
NC_021177:7159654:718079171807917181180390Streptomyces fulvissimus DSM 40593, complete genomeD-ribose pyranase 2 n18e-1785.5
NC_016113:11500:286142861429003390Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceribose ABC transporter (membrane bound ribose binding)8e-1785.5
NC_011725:681387:687974687974688369396Bacillus cereus B4264 chromosome, complete genomeD-ribose pyranase8e-1785.5
NC_007530:674265:684105684105684500396Bacillus anthracis str. 'Ames Ancestor', complete genomeribose abc transporter protein3e-1684
NC_005945:674337:684000684000684395396Bacillus anthracis str. Sterne, complete genomeribose ABC transporter protein3e-1684
NC_003997:674265:684104684104684499396Bacillus anthracis str. Ames, complete genomeribose ABC transporter protein3e-1684
NC_005957:667954:674987674987675382396Bacillus thuringiensis serovar konkukian str. 97-27, completeribose ABC transporter, permease3e-1684
NC_011773:688689:698542698542698937396Bacillus cereus AH820 chromosome, complete genomeD-ribose pyranase3e-1684
NC_012659:678289:684005684005684400396Bacillus anthracis str. A0248, complete genomeD-ribose pyranase3e-1684
NC_016779:657568:665514665514665909396Bacillus cereus F837/76 chromosome, complete genomeRibose ABC transporter high affinity permease RbsD3e-1684
NC_015161:1556766:156242115624211562816396Deinococcus proteolyticus MRP chromosome, complete genomeD-ribose pyranase7e-1682.4
NC_017095:166896:168375168375168761387Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeABC-type ribose transport system, auxiliary component6e-1579.3
NC_012785:638000:648054648054648452399Kosmotoga olearia TBF 19.5.1, complete genomeRbsD or FucU transport8e-1579
NC_012214:1:253832538325802420Erwinia pyrifoliae Ep1/96, complete genomeD-ribose high-affinity transport system3e-1373.9
NC_003366:1901898:190443919044391904834396Clostridium perfringens str. 13, complete genomeprobable ribose ABC transporter7e-1372.8
NC_008593:1797000:181901718190171819412396Clostridium novyi NT, complete genomeribose ABC transporter protein RbsD8e-1372.4
NC_008261:2117207:211974921197492120144396Clostridium perfringens ATCC 13124, complete genomeribose ABC transporter, ribose-binding protein1e-1271.6
NC_016614:686887:699051699051699470420Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose pyranase2e-1270.9
NC_004337:3590323:394205639420563942475420Shigella flexneri 2a str. 301, complete genomeD-ribose high-affinity transport system; membrane-associated protein2e-1270.9
NC_015589:1468774:148905014890501489448399Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRbsD or FucU transport4e-1270.1
NC_010320:143109:163609163609164001393Thermoanaerobacter sp. X514 chromosome, complete genomeD-ribose pyranase4e-1270.1
NC_014538:187747:203474203474203866393Thermoanaerobacter sp. X513 chromosome, complete genomeRbsD or FucU transport4e-1270.1
NC_015425:2024154:204577020457702046165396Clostridium botulinum BKT015925 chromosome, complete genomeribose ABC transporter protein RbsD1e-1168.6
NC_004557:2475030:249155124915512491946396Clostridium tetani E88, complete genomehigh affinity ribose transport protein rbsD8e-1165.9
NC_000853:960248:976804976804977211408Thermotoga maritima MSB8, complete genomeribose ABC transporter, membrane-associated protein7e-0855.8
NC_011978:1581994:158610815861081586515408Thermotoga neapolitana DSM 4359, complete genomeRibose ABC transporter, membrane-associated protein7e-0855.8
NC_008148:1859888:191606419160641916528465Rubrobacter xylanophilus DSM 9941, complete genomeRbsD or FucU transport1e-0755.5