Pre_GI: BLASTP Hits

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Query: NC_016842:775368:787166 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 787166, End: 787447, Length: 282

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016848:775822:787620787620787901282Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein8e-45178
NC_000919:773784:785582785582785866285Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar biosynthetic protein (fliQ)8e-45178
NC_010741:775000:787030787030787314285Treponema pallidum subsp. pallidum SS14, complete genomeflagellar biosynthetic protein8e-45178
NC_017268:775000:786832786832787116285Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar biosynthetic protein FliQ8e-45178
NC_021508:775264:787062787062787346285Treponema pallidum subsp. pallidum SS14, complete genomeIIISP family Type III (virulence-related) secretory pathway protein8e-45178
NC_015714:768500:780464780464780745282Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeIIISP family Type III (virulence-related) secretory pathway protein8e-45178
NC_016843:775371:787353787353787634282Treponema pallidum subsp. pertenue str. Gauthier chromosome,IIISP family Type III (virulence-related) secretory pathway protein8e-45178
NC_016844:775334:787520787520787801282Treponema pallidum subsp. pallidum DAL-1 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein8e-45178
NC_015500:1337180:135649513564951356764270Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthetic protein FliQ5e-28122
NC_018607:1134900:113570811357081135977270Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliQ6e-1992.8
NC_014150:233194:250344250344250613270Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliQ7e-1992.4
NC_012225:377441:380770380770381039270Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein (fliQ)7e-1992.4
NC_017243:1499757:150576515057651505983219Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein (fliQ)7e-1785.9
NC_009253:2615777:261761926176192617888270Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthetic protein FliQ7e-1785.9
NC_021184:2238500:225807322580732258342270Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliQ2e-1684.3
NC_009012:574145:595110595110595379270Clostridium thermocellum ATCC 27405, complete genomeflagellar biosynthetic protein FliQ2e-1581.3
NC_009698:2649453:265131626513162651585270Clostridium botulinum A str. Hall chromosome, complete genomeflagellar biosynthesis protein FliQ5e-1579.7
NC_010520:2860960:286282328628232863092270Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthesis protein FliQ6e-1579.3
NC_021182:2883716:289824828982482898517270Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliQ8e-1579
NC_014366:1814000:183466718346671834936270Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliQ8e-1579
NC_018604:1329228:133003513300351330304270Brachyspira pilosicoli WesB complete genomeputative flagellar protein FliO/FliZ3e-1477
NC_014330:2409559:241196124119612412230270Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative flagellar protein FliO/FliZ3e-1477
NC_019908:852230:867951867951868220270Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar protein FliO/FliZ3e-1477
NC_016894:2931213:293601829360182936284267Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliQ5e-1476.3
NC_006156:271410:286692286692286955264Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein7e-1475.9
NC_020291:4903981:492656349265634926832270Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FliQ8e-1475.9
NC_013851:3300278:330435433043543304623270Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliQ3e-1373.6
NC_014328:1135854:114378211437821144051270Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis protein FliQ4e-1373.6
NC_008576:4701930:104531045310722270Magnetococcus sp. MC-1, complete genomeflagellar biosynthetic protein FliQ7e-1372.8
NC_017238:272980:287041287041287304264Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthetic protein FliQ8e-1372.4
NC_008277:272741:286802286802287065264Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein8e-1372.4
NC_009617:4911595:491564949156494915918270Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeexport protein FliQ1e-1271.6
NC_011126:555483:588780588780589049270Hydrogenobaculum sp. Y04AAS1, complete genomeflagellar biosynthetic protein FliQ2e-1271.2
NC_015391:2059191:207716920771692077432264Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliQ3e-1270.5
NC_018664:1663324:166913216691321669398267Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthetic protein FliQ4e-1270.1
NC_008346:983816:984593984593984865273Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein7e-1269.3
NC_009654:3849774:387688438768843877153270Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliQ1e-1168.6
NC_015379:2999965:301395230139523014215264Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Flagellar biosynthetic protein2e-1167.8
NC_017986:4374979:437967543796754379944270Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliQ3e-1167.4
NC_009512:1691930:169662616966261696895270Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliQ3e-1167.4
NC_015921:272517:286475286475286738264Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthetic protein FliQ4e-1166.6
NC_001318:270488:287910287910288173264Borrelia burgdorferi B31, complete genomeflagellar biosynthesis protein (fliQ)4e-1166.6
NC_011728:269853:287278287278287541264Borrelia burgdorferi ZS7, complete genomeflagellar biosynthetic protein FliQ4e-1166.6
NC_002947:4931476:494736649473664947635270Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein8e-1165.9
NC_014652:628435:650692650692650961270Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein fliq8e-1165.9
NC_004129:1848701:185350818535081853777270Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein1e-1065.5
NC_000918:1353310:137931313793131379582270Aquifex aeolicus VF5, complete genomeflagellar biosynthesis protein FliQ1e-1065.1
NC_007759:1356439:135817813581781358447270Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein1e-1065.1
NC_013223:685628:707354707354707629276Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliQ2e-1064.3
NC_010501:4080937:409666440966644096933270Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliQ2e-1064.3
NC_009664:533021:537206537206537484279Kineococcus radiotolerans SRS30216, complete genomeexport protein FliQ family 34e-1063.5
NC_008593:1103293:112253111225311122800270Clostridium novyi NT, complete genomeflagellar biosynthetic protein FliQ5e-1063.2
NC_016893:43234:570205702057289270Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar biosynthesis protein6e-1062.8
NC_014926:1381152:141155514115551411824270Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliQ1e-0962
NC_010674:858397:872278872278872547270Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein FliQ1e-0961.6
NC_007492:1735595:173726717372671737536270Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein2e-0960.8
NC_010723:833870:850585850585850854270Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein FliQ3e-0960.8
NC_019940:293476:300635300635300904270Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliQ4e-0960.1
NC_020911:2921925:294283029428302943096267Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliQ2e-0857.8
NC_012440:659646:664958664958665227270Persephonella marina EX-H1, complete genomeflagellar biosynthetic protein FliQ2e-0857.8
NC_007645:3343815:335881133588113359080270Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscS4e-0856.6
NC_004344:26828:558125581256084273Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein6e-0856.2
NC_008710:277207:289921289921290184264Borrelia turicatae 91E135, complete genomeflagellar biosynthetic protein FliQ9e-0855.8
NC_014366:2513352:251578025157802516049270Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein1e-0755.1
NC_012880:1765920:183218118321811832450270Dickeya dadantii Ech703, complete genomeflagellar biosynthetic protein FliQ3e-0753.9
NC_007519:3527207:354193335419333542202270Desulfovibrio alaskensis G20 chromosome, complete genomeflagellar biosynthetic protein FliQ4e-0753.5
NC_013892:2689645:269053326905332690802270Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthesis protein4e-0753.5
NC_020126:8080574:808962680896268089895270Myxococcus stipitatus DSM 14675, complete genomeputative type III secretion system protein4e-0753.5
AP010958:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscS3e-0753.5
NC_013353:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscS3e-0753.5
NC_013361:5319497:533663653366365336905270Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscS3e-0753.5
NC_002695:4584177:461706346170634617332270Escherichia coli O157:H7 str. Sakai, complete genomeEscS6e-0753.1
NC_002655:4653160:468604646860464686315270Escherichia coli O157:H7 EDL933, complete genomeescS6e-0753.1
NC_011601:4096427:413082941308294131098270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscS6e-0753.1
NC_013008:4643825:467620846762084676477270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor6e-0753.1
NC_013364:3701895:374847037484703748739270Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscS6e-0753.1
NC_012791:2386000:240476924047692404951183Variovorax paradoxus S110 chromosome 1, complete genomeexport protein FliQ family 35e-0753.1
NC_013941:4470932:450456745045674504839273Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscS6e-0752.8
NC_011772:1575674:159692915969291597204276Bacillus cereus G9842, complete genomeputative flagellar biosynthetic protein FliQ2e-0651.6
NC_008209:253663:254846254846255115270Roseobacter denitrificans OCh 114, complete genomeflagellar biosynthetic protein FliQ4e-0650.1