Pre_GI: BLASTP Hits

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Query: NC_016830:4999946:5006610 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5006610, End: 5007224, Length: 615

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:2348202:237502423750242375584561Azotobacter vinelandii DJ, complete genomemutS-related protein4e-75280
NC_021150:2348214:237503623750362375596561Azotobacter vinelandii CA6, complete genomemutS-related protein4e-75280
NC_015559:3645181:364940836494083649983576Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSmr protein/MutS21e-24112
NC_015424:3520783:356808935680893568670582Aeromonas veronii B565 chromosome, complete genomeSmr domain-containing protein2e-23108
NC_003295:2507850:254245025424502543115666Ralstonia solanacearum GMI1000, complete genomehypothetical protein9e-2096.7
NC_014307:1131241:113190911319091132574666Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-1996.3
NC_009074:2914053:293852129385212939258738Burkholderia pseudomallei 668 chromosome I, complete sequenceSmr domain protein8e-1993.6
NC_008344:811386:812483812483812941459Nitrosomonas eutropha C91, complete genomeSmr protein/MutS21e-1789.4
NC_013446:4281250:430003543000354300691657Comamonas testosteroni CNB-2, complete genomeSmr protein/MutS26e-1787.4
NC_014931:5088125:511899751189975119680684Variovorax paradoxus EPS chromosome, complete genomeSmr protein/MutS23e-1684.7
NC_020409:393329:428881428881429609729Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSmr protein/MutS24e-1684.7
NC_006905:1766000:176600817660081766571564Salmonella enterica subsp. enterica serovar Choleraesuis strputative Smr domain3e-1581.6
NC_011149:1429523:144972514497251450288564Salmonella enterica subsp. enterica serovar Agona str. SL483,smr domain protein4e-1581.3
NC_006511:1273162:129337412933741293937564Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-1581.3
NC_011094:1726000:172602217260221726585564Salmonella enterica subsp. enterica serovar Schwarzengrund strSmr protein/MutS24e-1581.3
NC_011147:1267005:128721712872171287780564Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-1581.3
NC_016810:1709695:170969517096951710258564Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1581.3
NC_016857:1709695:170969517096951710258564Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein4e-1581.3
NC_017046:1709578:170957817095781710141564Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1581.3
NC_012880:2480000:248157424815742482140567Dickeya dadantii Ech703, complete genomeSmr protein/MutS26e-1580.9
NC_015761:1630000:164515516451551645718564Salmonella bongori NCTC 12419, complete genomehypothetical protein8e-1580.1
NC_004631:1623511:162351116235111624074564Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-1479.7
NC_003198:1336894:135710813571081357671564Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1479.7
NC_017030:6297351:631033263103326311036705Corallococcus coralloides DSM 2259 chromosome, complete genomeSmr domain-containing protein2e-1478.6
NC_008554:484267:504331504331505092762Syntrophobacter fumaroxidans MPOB, complete genomeSmr protein/MutS26e-1477.4
NC_009092:2833865:283869728386972839224528Shewanella loihica PV-4, complete genomeSmr protein/MutS29e-1476.6
CP002185:1493280:149451814945181495081564Escherichia coli W, complete genomeconserved hypothetical protein1e-1376.3
NC_009348:2034500:204926820492682049792525Aeromonas salmonicida subsp. salmonicida A449, complete genomeSmr/MutS family protein2e-1375.5
NC_000913:1404000:140400314040031404566564Escherichia coli K12, complete genomehypothetical protein2e-1375.5
AC_000091:1407693:140769314076931408256564Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1375.5
NC_012759:1296000:129606212960621296625564Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-1375.5
NC_012947:2366000:239067223906722391235564Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeSmr protein/MutS22e-1375.5
NC_014618:1452927:147094114709411471492552Enterobacter cloacae SCF1 chromosome, complete genomeSmr protein/MutS23e-1375.1
NC_009792:1345500:136625713662571366820564Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1374.3
NC_020064:3609844:364961136496113650183573Serratia marcescens FGI94, complete genomehypothetical protein2e-1272
NC_006511:529424:550602550602551153552Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-1270.5
NC_011147:529458:550636550636551187552Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-1270.5
NC_004631:531254:552381552381552932552Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-1270.5
NC_012125:1360593:138290313829031383454552Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-1270.5
NC_016832:531208:552335552335552886552Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1270.5
NC_017513:997716:100407510040751004680606Neisseria meningitidis G2136 chromosome, complete genomeSmr domain protein1e-1170.1
NC_009901:3148901:315346131534613153991531Shewanella pealeana ATCC 700345, complete genomeSmr protein/MutS22e-1168.9
NC_006512:952894:952894952894953457564Idiomarina loihiensis L2TR, complete genomehypothetical protein5e-1167.4
NC_008700:2607526:261089926108992611429531Shewanella amazonensis SB2B, complete genomeSmr domain protein9e-1167
NC_010334:3224009:322743132274313227961531Shewanella halifaxensis HAW-EB4, complete genomeSmr protein/MutS29e-1167
NC_008345:3199965:320481632048163205343528Shewanella frigidimarina NCIMB 400, complete genomeSmr protein/MutS22e-1065.9
NC_004347:3197219:320071332007133201243531Shewanella oneidensis MR-1, complete genomehypothetical protein3e-1065.1
NC_008321:1636148:165145416514541651984531Shewanella sp. MR-4, complete genomeSmr protein/MutS23e-1065.1
NC_008322:1708631:172281717228171723410594Shewanella sp. MR-7, complete genomeSmr protein/MutS23e-1065.1
NC_008577:1690946:170615317061531706683531Shewanella sp. ANA-3 chromosome 1, complete sequenceSmr protein/MutS27e-1063.9
NC_008044:3024125:302412530241253024727603Silicibacter sp. TM1040, complete genomeSmr protein/MutS22e-0962.8
NC_011663:1867000:188023518802351880765531Shewanella baltica OS223 chromosome, complete genomehypothetical protein3e-0961.6
NC_009052:3229775:323328632332863233816531Shewanella baltica OS155, complete genomeSmr protein/MutS24e-0961.6
NC_007802:179780:182236182236182847612Jannaschia sp. CCS1, complete genomeSmr protein/MutS22e-0858.9
NC_009952:3596399:362720336272033627796594Dinoroseobacter shibae DFL 12, complete genomeSmr protein/MutS25e-0857.8
NC_004545:96422:102976102976103506531Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomehypothetical protein5e-0857.4
NC_008609:3672653:370345037034503704151702Pelobacter propionicus DSM 2379, complete genomeSmr protein/MutS23e-0755.1