Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2833865 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283386528350311167ATP-NADAcoX kinaseQuickGO ontologyBLASTP
283505228362601209major facilitator superfamily MFS_1QuickGO ontologyBLASTP
283644728375411095Chorismate synthaseQuickGO ontologyBLASTP
28376732838617945modification methylase HemK familyQuickGO ontologyBLASTP
28386972839224528Smr proteinMutS2QuickGO ontologyBLASTP
28393982839868471phosphohistidine phosphatase SixAQuickGO ontologyBLASTP
284009228428692778peptidase M16 domain proteinQuickGO ontologyBLASTP
284343328477464314diguanylate cyclasephosphodiesterase with PASPAC and GAF sensorsQuickGO ontologyBLASTP
28478972848532636hypothetical proteinBLASTP
28485512848670120hypothetical proteinBLASTP
28489642849170207hypothetical proteinBLASTP
284932928514492121fatty acid oxidation complex alpha subunit FadJQuickGO ontologyBLASTP
285145428527641311acetyl-CoA C-acyltransferase FadIQuickGO ontologyBLASTP
28531732854129957ATPase associated with various cellular activities AAA_3QuickGO ontologyBLASTP
28541292855058930protein of unknown function DUF58QuickGO ontologyBLASTP
28550592855553495hypothetical proteinBLASTP
285554128565601020von Willebrand factor type AQuickGO ontologyBLASTP
285655728586382082Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
285863228602721641hypothetical proteinBLASTP