Pre_GI: BLASTP Hits

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Query: NC_015733:1943385:1947826 Pseudomonas putida S16 chromosome, complete genome

Start: 1947826, End: 1948947, Length: 1122

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:1737423:1738537173853717396881152Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase7e-154543
NC_004129:2201780:2207060220706022082021143Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family2e-134479
NC_017325:1488841:1500241150024115013261086Sinorhizobium meliloti SM11 chromosome, complete genomephage integrase family protein5e-106384
NC_009049:2131017:2151144215114421522411098Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencephage integrase family protein2e-77289
NC_009719:1135523:1153403115340311545451143Parvibaculum lavamentivorans DS-1 chromosome, complete genomeintegrase family protein6e-50198
NC_008686:1383891:1388943138894313899981056Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein3e-49196
NC_008358:263458:2825832825832836441062Hyphomonas neptunium ATCC 15444, complete genomesite-specific recombinase, phage integrase family4e-47189
NC_015675:4565500:4581355458135545824161062Mesorhizobium opportunistum WSM2075 chromosome, complete genomeintegrase family protein9e-44177
NC_018679:3843870:3849053384905338501291077Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completephage integrase family protein site-specific recombinase9e-36151
NC_014910:3727887:3734725373472537357771053Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein3e-35149
NC_011138:3881446:3884050388405038851921143Alteromonas macleodii 'Deep ecotype', complete genomesite-specific recombinase, phage integrase family protein1e-34147
NC_012724:3100430:3117025311702531181251101Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase9e-34144
NC_015381:3457784:3491685349168534928421158Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase3e-33142
NC_013961:3413011:341905934190593419892834Erwinia amylovora, complete genomeputative integrase/recombinase HI15725e-33142
NC_003911:2540453:255537225553722556031660Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family2e-31137
NC_013364:4990365:500060150006015001365765Escherichia coli O111:H- str. 11128, complete genome6e-28125
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-25116
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase3e-23109
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase4e-21102
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase2e-20100
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase3e-2099.8
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein4e-2099
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase9e-2098.2
NC_004547:611178:6162356162356173621128Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeshufflon-specific DNA recombinase1e-1997.8
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-1997.1
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase4e-1996.3
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein5e-1995.5
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein7e-1995.1
NC_014311:1635408:1647196164719616482151020Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase domain2e-1894
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase2e-1894
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-1893.6
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein5e-1892.4
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein8e-1891.7
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase2e-1790.1
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein2e-1790.1
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein6e-1788.6
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase6e-1788.6
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-1687.8
NC_005773:106000:1097241097241107971074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeshufflon-specific recombinase1e-1687.4
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase2e-1687
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein3e-1686.7
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase3e-1686.3
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family5e-1685.5
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family9e-1684.7
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase9e-1684.7
NC_008752:415599:431227431227432225999Acidovorax avenae subsp. citrulli AAC00-1, complete genomephage integrase family protein1e-1584.3
NC_013364:4990365:500026750002675000596330Escherichia coli O111:H- str. 11128, complete genome2e-1583.6
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase2e-1583.6
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase2e-1583.6
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase4e-1582.8
NC_015563:3571682:359131135913113592255945Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein9e-1581.6
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein1e-1481.3
NC_010943:325739:334344334344334940597Stenotrophomonas maltophilia K279a, complete genomeputative DNA recombinase1e-1480.9
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein1e-1480.9
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific1e-1480.9
NC_014910:966761:9810169810169826051590Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein2e-1480.9
NC_011894:79282:884998849988762264Methylobacterium nodulans ORS 2060, complete genome2e-1480.9
NC_011770:4924127:4931593493159349327051113Pseudomonas aeruginosa LESB58, complete genomeshufflon-specific recombinase2e-1480.1
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein6e-1478.6
NC_011000:183928:2032112032112043381128Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid recombinase6e-1375.5
NC_018679:3843870:3850496385049638516621167Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeshufflon-specific DNA recombinase7e-1375.1
NC_007651:3560652:356953635695363570204669Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family8e-1375.1
NC_007508:1446526:1462729146272914638351107Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeshufflon-specific recombinase1e-1274.3
NC_010511:6485500:649108764910876491626540Methylobacterium sp. 4-46 chromosome, complete genome2e-1273.9
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase3e-1273.6
NC_008800:1300500:1308992130899213101101119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase protein2e-1273.6
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN4e-1272.8
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase2e-1170.9
NC_009840:396319:405988405988406953966Prochlorococcus marinus str. MIT 9215, complete genomeSite-specific recombinase XerD2e-1067
NC_009074:3409849:3414673341467334163881716Burkholderia pseudomallei 668 chromosome I, complete sequenceIntegrase2e-1066.6
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family2e-1066.6
NC_015856:3059737:307056230705623071161600Collimonas fungivorans Ter331 chromosome, complete genomesite-specific recombinase, phage integrase family4e-1066.2
NC_011206:1233985:123407912340791235074996Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein5e-1065.9
NC_013854:2148215:215822121582212159126906Azospirillum sp. B510, complete genomeintegrase2e-0963.5
NC_010002:2110953:2110953211095321119541002Delftia acidovorans SPH-1, complete genomeintegrase family protein2e-0963.5
NC_008314:2686851:2690066269006626911061041Ralstonia eutropha H16 chromosome 2, complete sequencephage integrase family protein3e-0962.8
NC_008816:369074:379721379721380686966Prochlorococcus marinus str. AS9601, complete genomehypothetical protein4e-0962.8
NC_017033:2081206:210106921010692101995927Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerD4e-0962.8
NC_016809:389561:4020064020064030491044Haemophilus influenzae 10810, complete genomeDLP12 prophage integrase5e-0962.4
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein7e-0962
NC_009074:1470689:148737214873721487830459Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0860.5
NC_020209:945000:952516952516952695180Pseudomonas poae RE*1-1-14, complete genomechorismate mutase3e-0860.1
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-0860.1
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein1e-0757.8
NC_007577:353755:364398364398365012615Prochlorococcus marinus str. MIT 9312, complete genomeputative site-specific integrase/recombinase1e-0757.8
NC_009659:2849000:2862972286297228641861215Janthinobacterium sp. Marseille chromosome, complete genomephage integrase/recombinase2e-0757.4
NC_006350:3865584:3873083387308338740841002Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid recombinase2e-0757
NC_015422:3581848:3595358359535835966021245Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein3e-0756.6
NC_008817:387408:399717399717399998282Prochlorococcus marinus str. MIT 9515, complete genomehypothetical protein3e-0756.6
NC_015856:1182974:1197577119757711985781002Collimonas fungivorans Ter331 chromosome, complete genomephage integrase4e-0756.2
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein4e-0755.8
NC_014972:1126426:1145414114541411465951182Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein6e-0755.5
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein7e-0755.5
NC_009429:622359:6440406440406451941155Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein9e-0755.1
NC_007651:3719191:373395337339533734393441Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family1e-0654.7
NC_008687:256692:2735792735792747331155Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein1e-0654.7
NC_011989:594353:6107606107606117911032Agrobacterium vitis S4 chromosome 1, complete sequenceIntegrase2e-0654.3
NC_020418:3133831:3146831314683131479941164Morganella morganii subsp. morganii KT, complete genomeintegrase2e-0654.3
NC_014722:771483:788089788089788976888Burkholderia rhizoxinica HKI 454, complete genomeDNA integration/recombination/inversion protein2e-0653.5
NC_014323:961825:970186970186971163978Herbaspirillum seropedicae SmR1 chromosome, complete genomesite-specific phage recombinase/integrase2e-0653.5
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein4e-0652.8
NC_005139:1784000:1822239182223918234471209Vibrio vulnificus YJ016 chromosome I, complete sequenceintegrase5e-0652.4
NC_009943:748788:7553137553137565061194Candidatus Desulfococcus oleovorans Hxd3, complete genomeintegrase family protein5e-0652.4
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein6e-0652.4
NC_014010:1020488:1055855105585510572671413Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein8e-0652
NC_012947:3231893:3247313324731332484761164Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase7e-0652
NC_012967:531000:5369295369295380921164Escherichia coli B str. REL606 chromosome, complete genomeputative integrase7e-0652
NC_011415:600375:6083326083326094951164Escherichia coli SE11 chromosome, complete genomephage integrase7e-0652
NC_000913:558920:5640385640385652011164Escherichia coli K12, complete genomeDLP12 prophage; predicted integrase7e-0652
NC_010473:498252:5033705033705045331164Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted integrase7e-0652
AC_000091:558920:5640385640385652011164Escherichia coli W3110 DNA, complete genomepredicted integrase7e-0652
NC_012759:461680:4667984667984679611164Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative integrase7e-0652
NC_011751:643976:6449436449436461061164Escherichia coli UMN026 chromosome, complete genomeputative integrase; DLP12 prophage6e-0652
NC_007722:168937:1762001762001773691170Erythrobacter litoralis HTCC2594, complete genomesite-specific recombinase, phage integrase family protein8e-0652